Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00599 ATGTTGTCCATTTTCCGTCAATACACCTTCGACGACTCGTTCGAGCAAGTCTTCGTCTCCAGCAAGTTCCTGAAGGAGTACCAAATCGCCCTCACCTTCGCCACCGACTACGACGACGAGGATCACCCCACCAACGGCCTCTTCCGCCCGACCTGGGACCTAAGCAAGGTCACCCCCGAAGCCATCGCGAAATTCAAGGAGAAGAACAGCGACGTCGACGTCAAAGTCTTCATCTCCATCGGCAACCGCGGCACCCACCAGCCCTTCAAACCCCTCGACAACAAAACGTGGATCGCCAACGCCACCGAGTCCCTCACGAGCCTCGTCCATGGCGACGAGCTCGGCCTCCACGTGGACGGCATTGACGTGCTGTACGAGCACATCGACGCCTCCCCCGGTGACTTTATCGAGTGCGTGGGACAGCTCATAAGGAACCTCAAGCAGAATGGGGTGGTCACCGAAGCTTCCATTTCCCCCACGTTTCCACTGAACAGGGACTTTTACTCTCGCTTGTACAGTGCTGTCTCCTTCTTCATTGATTTTGTGGATTACCAGTTCCAGAAGGAAGTTGATTTTGTGGCGAACCCCAGTGAGTTGTTTGAGAAGTACAGCGTTCTAACGAAGGTTTATCCGAGAAGGAAACTCTTGGCTGGGTACAGCGCTGAGAACGAGGACTGGGCCACCCTGTCACCGATCGTCTTCTTCCTCGGTGGCATGGACATTCTCAAGAAGAGAAGGGCTCCTGGAATCTCCATTCATTACCATAATTTCTATGCTCAACAATGA 786 0.5382 MLSIFRQYTFDDSFEQVFVSSKFLKEYQIALTFATDYDDEDHPTNGLFRPTWDLSKVTPEAIAKFKEKNSDVDVKVFISIGNRGTHQPFKPLDNKTWIANATESLTSLVHGDELGLHVDGIDVLYEHIDASPGDFIECVGQLIRNLKQNGVVTEASISPTFPLNRDFYSRLYSAVSFFIDFVDYQFQKEVDFVANPSELFEKYSVLTKVYPRRKLLAGYSAENEDWATLSPIVFFLGGMDILKKRRAPGISIHYHNFYAQQ 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00599 261 SUPERFAMILY (Trans)glycosidases 28 252 IPR017853 -
Spst5g00599 261 PRINTS 2-S globulin family signature 19 38 IPR000677 -
Spst5g00599 261 PRINTS 2-S globulin family signature 103 125 IPR000677 -
Spst5g00599 261 PRINTS 2-S globulin family signature 177 200 IPR000677 -
Spst5g00599 261 PRINTS 2-S globulin family signature 62 80 IPR000677 -
Spst5g00599 261 PRINTS 2-S globulin family signature 45 60 IPR000677 -
Spst5g00599 261 Gene3D Glycosidases 2 260 - -
Spst5g00599 261 Pfam Glycosyl hydrolases family 18 60 230 IPR001223 GO:0005975
Spst5g00599 261 PANTHER CHITINASE 2-LIKE 4 256 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00599 - - gmx:100776259 431.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00599 5 5087825 5088610 Spst5g00599 5 5087825 5088610 ECH
Spst5g00599 5 5087825 5088610 Spst11g01441 11 38845245 38846156 PCT