Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01441 ATGGCCATATTCACTCTTAAACCTTTCTTCTTCATCTTCATATTACTCACATCAACCCATGCTGGAACAACCTCCGTCCCAAGTTCAAACCTATTCCGAGAATATATAGGAGCCGAGTTCAACAACGTTAAATTTTCTGATGTCCCCGTTAACCCAAGTGTCGAATTCCACTTCATTCTCTCTTTTGCCATCGACTATGACACTTCATCATCCCCCTCTCCCACCAACGGAAACTTCAACATCTTTTGGGACACCAACAACCTTAACCCTACCCAGGTTTCCGCCATCAAGACCAAAAACTCAAACGTCAAAGTAGCCCTTAGTCTTGGTGGAGACAGCGTCGGAGGTGGCTCTGCTTTCTTCAATCCCTCTTCAATCGATTCTTGGGTTTCCAATGCAGTTTCTTCACTGACAACCATAATCAAAGATTACAACTTGGATGGAATCGACATCGACTACGAGCACTTCCAAACGGACCCTGAAACCTTCTCCGAGTGTGTGGGGAGGTTAATCAAGACGCTGAAATCCAATGGGGTCATAAAATTTGCCTCGATTGCTCCTTTTGATGATGATCAGGTTCAAAGCCACTACTTGGCCTTGTGGAAGAGTTATGGGAGCCTCATAGACTATGTTAACTTTCAGTTTTATGCATATGACAAGGGCACTAGTGTGGCACAGTTCATTGATTACTTCAACACGCAAAGTTCAAATTACGATGGTGGAAAGGTATTGGTGAGTTTCAGTACTGATGGGAGTGGTGGGTTGGCCCCGAATGATGGGTTCTTTGCAGCATGTCACACGCTAAAGAGTCAGCAAAAACTTCATGGTATCTTTGTTTGGTCTGCTGATGACTCCATGGGAAATGGTTTTCGCTATGAGAAGCAATCACAAGCCCTTTTAGCTTTACCCTAG 912 0.443 MAIFTLKPFFFIFILLTSTHAGTTSVPSSNLFREYIGAEFNNVKFSDVPVNPSVEFHFILSFAIDYDTSSSPSPTNGNFNIFWDTNNLNPTQVSAIKTKNSNVKVALSLGGDSVGGGSAFFNPSSIDSWVSNAVSSLTTIIKDYNLDGIDIDYEHFQTDPETFSECVGRLIKTLKSNGVIKFASIAPFDDDQVQSHYLALWKSYGSLIDYVNFQFYAYDKGTSVAQFIDYFNTQSSNYDGGKVLVSFSTDGSGGLAPNDGFFAACHTLKSQQKLHGIFVWSADDSMGNGFRYEKQSQALLALP 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01441 303 Gene3D Glycosidases 28 302 - -
Spst11g01441 303 SUPERFAMILY (Trans)glycosidases 29 295 IPR017853 -
Spst11g01441 303 ProSitePatterns Glycosyl hydrolases family 18 (GH18) active site signature. 146 154 IPR001579 GO:0004553|GO:0005975
Spst11g01441 303 CDD GH18_narbonin 31 285 - -
Spst11g01441 303 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 30 297 IPR001223 GO:0005975
Spst11g01441 303 PANTHER CHITINASE 2-LIKE 12 301 - -
Spst11g01441 303 PRINTS 2-S globulin family signature 263 282 IPR000677 -
Spst11g01441 303 PRINTS 2-S globulin family signature 29 42 IPR000677 -
Spst11g01441 303 PRINTS 2-S globulin family signature 93 111 IPR000677 -
Spst11g01441 303 PRINTS 2-S globulin family signature 76 91 IPR000677 -
Spst11g01441 303 Pfam Glycosyl hydrolases family 18 57 223 IPR001223 GO:0005975
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01441 - - gmx:100810745 534.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00599 5 5087825 5088610 Spst11g01441 11 38845245 38846156 PCT