Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00580 ATGACAATGTGTAACTCATTGGATGGGCACTGCCAGTGCCCTTGTTCCAAGGCTAAACGGGAGTCCTTGTGGCAGACCCCAAAGACAAGAAGTAGCTCCTCTGAAGTGCCTCAGAAAGTGTCCCCTCGTGGTGGACGCCAACCCAGGCCTGCTACGCTAGACACTGCATCTTCATTAAACCAAGCTAACAAAACTTCAAAGGATAATAGAAGTCCCAAAATCACCGAGCGCAGATCACCCAGAAGTCCAGCTCCAGAGAGGAAGCGTCCTAGCAGAATATCTGAATTAGAATCTCAGATTTCTCAACTCAAAGAGGATTTGAAAGTTGTGAGGAACCAGCTCAGTTTGTCCGACTCATCCAAGAAACAAGCTCAGCAAGATGCTGAAGAGTCCAAGAAACAACTAGTTGCCGTATCTGTAAAACTTGAAGACTCTCAACAGCAACTTCTGAAGTTCTCTGCTACAGAACAAGCTCGTGTTATCGAGCTCCAGAAAACTATAGAAGAGCATGATAAGGCGTGGCAATCCGAACTCAAGGCTGCCCAACAGAAACTCTCAGACAACACTGATGCACTGACCTCTGCCATCGATGAAATTCAGCAGCTAAAGGTTCAACTTGAATTGGTAGCTAATTGTGAGAATGCACACACCCAAATTGCAGAATCGTCAGACGTGGAATTACTTAACTTGAAGGATAACTTGGCAGAATCTCTTTCCCTCGTGGAGAACATGAAAAATCAACTCAGGGATTCTAAAGAGTCAGGTCAGGCACAAGCTTTGGTCAATGAGACTTTGCGGCAACTTGAGGCTGCAAAACGAACTGTTGAGTTCCTGAGAGCTGATGCTGCAAAAGCTGTGCATGGCTACAACTCTGCTGCTTTGGAGTTAGACCAATCTAGAGCACGGGTGGACTCGCTTGAGACACTAGTAAGCAAACTTGAGTTTGGCTTCATTAGTAACAAATGCAACCATTCTTTAAATCTTGCAGATGATGGGAACATAGAGCTGAAAACTGATACATTGCAAAAGGGTGAGGCTCCTAATCGCATTGAAGAAGAAATTTATTCTCTGAGGTCTGCCATAGAGACTGCTGAGATTAAGTACAAGGAAGAACAGATTCAGTGTTCATTGAAGCTCAGGAAAGCCTACGAGTTGATTGAGCAGATAAAATCAGAATCAAGCCAGAGGGAATCCGAGCTAGAGGCAGAATTGAAAAGAAAGAATGTTGACATTGAACACTTGAAGGCTAACCTAATGGATAAGGAAACTGAGTTGCAGGGCATTGTGGAGGAGAATGAGAAGTTGAATTTGCAGCTTGAAAAGAGCATGTCATCCCAAAGAGAACTTCAACTTAAAAAGGAGATTCGAAAACTAGATGAATGTGTGGCTGAGTTGAAGGGTGATCTAATGGACAAGGAAACAACATTGCAAAACATATCTGAAGAGAATGAAATGCTGAAGTTGGAGATCAGTAAGAGGTTTGCACATGGTGGTAAAGTGGGGGAGGAATTTGTTGCAGAACTTGAGGCAGCTAAGGCTGCGGAACGTGAGGCTGTTATGAAACTTGGTATTGTGATGGAAGATGCTGAAAGGAACAACCGAAAGGCGGTGAGGGTGGCTGAGCAGCTGGAAGCATCTCAGGCAGCAAATTCAATAATAGAAGCTGAACTGAGAAGATTGAAGGTACAGTCTGATCAATGGAGGAAGGCTGCAGAGGCTGCTGCCGCTATGCTCTCAGCAGGGAACAATGGGAAGCTGACTGAAAGATCAATGTCTTTAGACAACAACTATAACTCTATAATGAATAAGTACTCACCTTTCTGTGAAGAACTTGATGATGATTTCCAAACCAAGAAAAATGGGAACATGCTGAAGAAGATTGGCGTCTTGTGGAGGAAACCTCAAAAATAG 1911 0.4396 MTMCNSLDGHCQCPCSKAKRESLWQTPKTRSSSSEVPQKVSPRGGRQPRPATLDTASSLNQANKTSKDNRSPKITERRSPRSPAPERKRPSRISELESQISQLKEDLKVVRNQLSLSDSSKKQAQQDAEESKKQLVAVSVKLEDSQQQLLKFSATEQARVIELQKTIEEHDKAWQSELKAAQQKLSDNTDALTSAIDEIQQLKVQLELVANCENAHTQIAESSDVELLNLKDNLAESLSLVENMKNQLRDSKESGQAQALVNETLRQLEAAKRTVEFLRADAAKAVHGYNSAALELDQSRARVDSLETLVSKLEFGFISNKCNHSLNLADDGNIELKTDTLQKGEAPNRIEEEIYSLRSAIETAEIKYKEEQIQCSLKLRKAYELIEQIKSESSQRESELEAELKRKNVDIEHLKANLMDKETELQGIVEENEKLNLQLEKSMSSQRELQLKKEIRKLDECVAELKGDLMDKETTLQNISEENEMLKLEISKRFAHGGKVGEEFVAELEAAKAAEREAVMKLGIVMEDAERNNRKAVRVAEQLEASQAANSIIEAELRRLKVQSDQWRKAAEAAAAMLSAGNNGKLTERSMSLDNNYNSIMNKYSPFCEELDDDFQTKKNGNMLKKIGVLWRKPQK 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00580 636 MobiDBLite consensus disorder prediction 25 40 - -
Spst5g00580 636 Coils Coil 93 113 - -
Spst5g00580 636 Coils Coil 397 438 - -
Spst5g00580 636 PANTHER INTERACTOR OF CONSTITUTIVE ACTIVE ROPS 2, CHLOROPLASTIC-RELATED 25 636 IPR029688 -
Spst5g00580 636 Coils Coil 462 489 - -
Spst5g00580 636 MobiDBLite consensus disorder prediction 69 94 - -
Spst5g00580 636 Coils Coil 526 563 - -
Spst5g00580 636 Coils Coil 261 281 - -
Spst5g00580 636 MobiDBLite consensus disorder prediction 1 94 - -
Spst5g00580 636 Coils Coil 227 247 - -
Spst5g00580 636 Coils Coil 121 148 - -
Spst5g00580 636 MobiDBLite consensus disorder prediction 51 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00580 Spst-Chr5 4831502 4836207 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00580 - - gmx:100798050 973.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00580 5 4831502 4836207 Spst5g00580 5 4831502 4836207 ECH
Spst5g00580 5 4831502 4836207 Spst11g01413 11 38527956 38531768 PCT