Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01413 ATGCAGACACCAAAGACAAGAAGTGGGTCCTCTGAAATAACTCAGAAGGTGTCTCCGCGTGCCGTGCGCCAACTCAAGCCTACTACTGTGGACATTGAGTCTGTATCTTCTTCAAGTCAAGCTACTAAACCATCAAAAGAGAGAAGCCCCAAAGTCACTGATCGCAGATCACCCAGAAGCCCAGTTGTTGAGAGGAAGCGCCCCAGCAAAATATCTGAGTTGGAATCTCAAATTTCTCAACTCCAAATTGATTTGAAGAAGGTGATGGATCAGCTTGTTTTGTCTGAATCAAGCAAGAAGCAAGCGCAGCAAGATGCCCTGGAGTCCAAGGAGCAACTATTAGCACTATCTACAAAATTTGAAGAGTCACAAAAACACGTTCTGGATCTTTGTGCTGCTGGAGAAGCTCGTATTCTTGAGCTACAGAAAATTATAGATGAGCGTGATATGGCATGCCAATCTGAACTTGAGGCCTCCAAAAAGCAGCTCTCTGTTGAGTCTGCTGCCTTGGCCACTGCAATGAATGAAATTCAGATGCTCAAGGCCGAACTTGAATTGGTAGCTAATTGTGAGAGTCTGCAATCTCAACAAGCAGAATCAGCAGACATGGAGCTACTAAAACTGAAGCAGAACTTGGCTGAAACTCTTTCTCTTGTGGACATCATGAAAAACCAACTTAGGGATTGCAAAGAATCAGAAGCTCAGGCCCAAGCATTGGTCAATGAAACCATGTTGGAACTTGAGGCTGCAAAAAGAACTGTTGAGCTCCTAAGGGATGATGTTGCAAAAGCTGTTGATGGCTACAACACTATAGCTTTGGAGTTAGACCAATCTAAAGCACGGGTGAACTCACTAGATGCACTTGTTTGCATACGTGAGACGGATCCCATCAGTAACAAATTTGAACACCAACCTGAAATATTGAAAGAGGGAGAGGATCCTAATCATCTAGAAGCTGAAGTTGTTTCTTTGAAGTCCGAGGTTGGACGCCTGCGATCTGCTATGGAGACTGCTGAGACTAAATACCAAGAAGAACATATTCAAAGCACGGTGCAGATCAGGAGTGCCTATGAGCTGGTGGAGCAGATAAAATCTGAATCTAGAAAGAGGGAATGTGAGCTAGAGGCTGAGTTAAAAAGGAAGAAAGCTGACATTGAAGAGTTGAAGGCCAACCTAATGGATAAGGAAACTGAGTTGCAAGGCATTGTGGAGGAGAATGAGGACTTGAACCTCAAACTTCAAGAGAGCATTTCATCCAAAAATGAGCATGTACTCAAAAGGGAAACTAAAAGACTAGAAGAATGTGTGGCTGAACTGAAGGCAGATATGATGGACAAAGAGACAACACTGCAAAGCATATCTGAGGAGAATGAAATGCTGAAGATGGAAATCAACAAGCTTTCAGATGGTAGCAAAGTGAGTGAGGAAGTTGCAGCTGAGATAGAGGGAGCTAAGGCTGGGGAACGCGAGGCTCTCATGAAACTTGGAATTGTGATGGAGGAAGCAGATAGCAGCAACATGAAGGCTGCAAGAGTGGCTGAGCAGCTAGAAGCAGCACAGGCAGCAAATATAGAGATGGAAGCAGAGCTTCGAAGACTGAAGGTGCAATCTGATCAGTGGAGGAAGGCTGCAGAGGCAGCTGCTGCTATGCTTTCATCAGGAAACAATGGGAAACTCACAGAACGGACTGTTTCTTTGGATAACAACTATAAGTGCTCACCCTATGCCCAAGACATTGATGATGACTTCCAGAGAAAGAAAAATGGAAACATGCTGAAGAAGTTTGGGGTCTTATGGAAGAAACCTCAAAAGTAG 1815 0.4424 MQTPKTRSGSSEITQKVSPRAVRQLKPTTVDIESVSSSSQATKPSKERSPKVTDRRSPRSPVVERKRPSKISELESQISQLQIDLKKVMDQLVLSESSKKQAQQDALESKEQLLALSTKFEESQKHVLDLCAAGEARILELQKIIDERDMACQSELEASKKQLSVESAALATAMNEIQMLKAELELVANCESLQSQQAESADMELLKLKQNLAETLSLVDIMKNQLRDCKESEAQAQALVNETMLELEAAKRTVELLRDDVAKAVDGYNTIALELDQSKARVNSLDALVCIRETDPISNKFEHQPEILKEGEDPNHLEAEVVSLKSEVGRLRSAMETAETKYQEEHIQSTVQIRSAYELVEQIKSESRKRECELEAELKRKKADIEELKANLMDKETELQGIVEENEDLNLKLQESISSKNEHVLKRETKRLEECVAELKADMMDKETTLQSISEENEMLKMEINKLSDGSKVSEEVAAEIEGAKAGEREALMKLGIVMEEADSSNMKAARVAEQLEAAQAANIEMEAELRRLKVQSDQWRKAAEAAAAMLSSGNNGKLTERTVSLDNNYKCSPYAQDIDDDFQRKKNGNMLKKFGVLWKKPQK 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01413 604 Coils Coil 71 91 - -
Spst11g01413 604 Coils Coil 436 470 - -
Spst11g01413 604 PANTHER INTERACTOR OF CONSTITUTIVE ACTIVE ROPS 2, CHLOROPLASTIC-RELATED 1 604 IPR029688 -
Spst11g01413 604 MobiDBLite consensus disorder prediction 1 22 - -
Spst11g01413 604 Coils Coil 375 412 - -
Spst11g01413 604 Coils Coil 222 260 - -
Spst11g01413 604 Coils Coil 499 543 - -
Spst11g01413 604 MobiDBLite consensus disorder prediction 1 71 - -
Spst11g01413 604 MobiDBLite consensus disorder prediction 47 71 - -
Spst11g01413 604 Coils Coil 321 341 - -
Spst11g01413 604 MobiDBLite consensus disorder prediction 29 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01413 Spst-Chr11 38527956 38531768 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01413 - - gmx:100798862 952.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00580 5 4831502 4836207 Spst11g01413 11 38527956 38531768 PCT