Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00549 ATGAGCGAGATGAGTTCGTCGGAGCATGACTCCGAATCTTCCATTCTGCTCCACTTGCCTCCGCTCTCACAGAGCCTATTCGATGCCGAACCATCGGACCTCCAACAACCCAACGGATCTGCCGCCCGGCCGTCCTCCGATCCCTCCAGCCCTACTAGCAGCGGTTACGCTCCCGAGCGGGGAAGCAGCACTGCCACATCCGTTTCCCATGTGGAAGAGGTCCTTAGCAACGAAATTCAGGAGATCACCATCCACGATCCCCAACCTCTCTCTCACTCTTCCTGGCTTCCCGGAAAACGACACGGCGATGAGGATGATGCTTCTATTTCATGGAGGAAAAGGAAGAAGCATTTTTTTGTTCTGAGTCATTCTGGCAAACCAATATATTCTAGGTATGGAGACGAACACAAGCTTGCTGGTTTTTCAGCAACGTTGCAGGCAATCATTTCCTTTGTGGAGAATGGAGGTGACCATGTCAAATTGGTGAGGGCTGGAAAGCATCAGGTGGTTTTTCTTGTAAAAGGACCAATTTACTTGGTCTGCATCAGCTGCACAGAAGAGCCCTACGAGTCACTAAGGGGGCAGTTAGAGATTATTCATGGCCAGATGATTGTTATACTAACAAAGTCAGTAAACAGATGTTTTGAGAAGAATCCAAAGTTTGATATGACACCCTTGCTTGGTGGAACAGACATTGTTTTCTCTTCACTAATCCACTCTTTTAGTTGGAACCCAGCTACATTTCTTCATGCGTATACTTGTCTGCCTCTTGCATATGCAACAAGGCAAGCTGCTGGTGCTATATTGCAAGACGTTGCTGATTCTGGTGTTCTGTTTGCAATTCTGATGTGCAGACACAAGGTAATCAGTCTAGTTGGTGCTCAGAAAGCCTCTCTTCATCCAGATGACATGCTGCTCCTGGCCAACTTTGTTATGTCATCTGAATCGTTTAGGACTTCAGAGGCATTTTCTCCGGTTTGCTTGCCAAGATACAATGCTTTGGCATTTTTGTATGCTTATATCCACTTTTTTGATGATGATACATATTTGATGTTGCTGACCACGAGTTCTGATTCATTTTACCATCTTAAGGATTGCAGGATTGGTATTGAAGCTGTCCTTTTGAAGTCAAATGTCCTTAGTGAGGCTCAAAGATCCTTGCTAGATGGTGGGATGCGTGTTGAGGATCTACCACCCTTACCTCGTTCTGGCTCTTCTCATTTAGGTCAGCATAGAGTTCCATCAGATTCCCCTGAAAGATCAAGGGAACCTGATTGTGGCGTTGGTGGTGCTGCTGGGTTGTGGCATTTTATTTATCGCAGCATTTATCTGGATCAATATATATCTTCAGAGTTCTCATCACCAATTAACACTCCTAAGCAGCAGAAAAGACTGTATAGAGGTTACCAGAAACTTTTTGCTTCCATGCATGATAAAGGAATTGGGCCACACAAAACTCAGTTTAGAAGGGATGAAAACTACGTGCTGCTCTGTTGGGTAACACAGGATTTTGAGCTTTATGCTGCATTTGATCCCCTTGCAGACAAGGCCTTGGCAATAAAGACTTGCAATCGGGTGTGTCAATGGGTAAAAGATGTGGAAAATGAAATATTTTTGCTAGGAGCTAGCCCCTTTTCGTGGTGA 1644 0.4513 MSEMSSSEHDSESSILLHLPPLSQSLFDAEPSDLQQPNGSAARPSSDPSSPTSSGYAPERGSSTATSVSHVEEVLSNEIQEITIHDPQPLSHSSWLPGKRHGDEDDASISWRKRKKHFFVLSHSGKPIYSRYGDEHKLAGFSATLQAIISFVENGGDHVKLVRAGKHQVVFLVKGPIYLVCISCTEEPYESLRGQLEIIHGQMIVILTKSVNRCFEKNPKFDMTPLLGGTDIVFSSLIHSFSWNPATFLHAYTCLPLAYATRQAAGAILQDVADSGVLFAILMCRHKVISLVGAQKASLHPDDMLLLANFVMSSESFRTSEAFSPVCLPRYNALAFLYAYIHFFDDDTYLMLLTTSSDSFYHLKDCRIGIEAVLLKSNVLSEAQRSLLDGGMRVEDLPPLPRSGSSHLGQHRVPSDSPERSREPDCGVGGAAGLWHFIYRSIYLDQYISSEFSSPINTPKQQKRLYRGYQKLFASMHDKGIGPHKTQFRRDENYVLLCWVTQDFELYAAFDPLADKALAIKTCNRVCQWVKDVENEIFLLGASPFSW 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00549 547 MobiDBLite consensus disorder prediction 1 69 - -
Spst5g00549 547 MobiDBLite consensus disorder prediction 399 425 - -
Spst5g00549 547 MobiDBLite consensus disorder prediction 1 20 - -
Spst5g00549 547 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 525 545 IPR004353 GO:0006623
Spst5g00549 547 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 296 312 IPR004353 GO:0006623
Spst5g00549 547 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 512 525 IPR004353 GO:0006623
Spst5g00549 547 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 321 344 IPR004353 GO:0006623
Spst5g00549 547 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 219 231 IPR004353 GO:0006623
Spst5g00549 547 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 272 285 IPR004353 GO:0006623
Spst5g00549 547 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 116 133 IPR004353 GO:0006623
Spst5g00549 547 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 349 375 IPR004353 GO:0006623
Spst5g00549 547 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 248 269 IPR004353 GO:0006623
Spst5g00549 547 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 168 182 IPR004353 GO:0006623
Spst5g00549 547 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 134 154 IPR004353 GO:0006623
Spst5g00549 547 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 496 510 IPR004353 GO:0006623
Spst5g00549 547 Pfam Second Longin domain of FUZ, MON1 and HPS1 277 367 IPR043971 GO:0016192
Spst5g00549 547 Pfam Third Longin domain of FUZ, MON1 and HPS1 433 533 IPR043970 GO:0016192
Spst5g00549 547 MobiDBLite consensus disorder prediction 81 105 - -
Spst5g00549 547 PANTHER SAND PROTEIN-RELATED 29 545 IPR004353 GO:0006623
Spst5g00549 547 MobiDBLite consensus disorder prediction 28 69 - -
Spst5g00549 547 Pfam First Longin domain of FUZ, MON1 and HPS1 116 236 IPR043972 GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00549 Spst-Chr5 4473710 4479202 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00549 K20195 - gmx:100816794 994.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00549 5 4473710 4479202 Spst5g00549 5 4473710 4479202 ECH
Spst5g00549 5 4473710 4479202 Spst11g01354 11 38046132 38058758 PCT