LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Spst11g01354	ATGAAAGTTAAGGAAGTGATAGAGGACACAATGGAAATTGAGGGGGCGACGAAGGGTGAAGGCGAAAAAGAAGAAGAGGAATCTTTTCATAAAAGAGAAAAAATGTTTAAGGCTTTTAAGAGGCCAAATATTCTCTTCTCCATTGCTAGAGGAGTTGTTGAGAGGCAAGGGTATGCTTTCTTTGTTGACATAGAATATGAGAGACTACCATACCTTTACCCAGCCGAGACAAGCAGAGACTGGCAGAGCAACAACAATTTGCTTCAAAACCCCAATCATCTCTCTCTCTCTACAATCATTACTATGACAGACGACGAAACAGAGTCCGAGGGAGAGATTATGGCCTCCGTCAAACCCGCTTCGGAGGACGCTCCATCCAGCCCCGGCAGCAGCGGCTACGCCGGCGAAGGAGGCAGCACCAGTGCCACCACCGGTTCGCAATTCGAACTTGAGCGCGAAGAAATAGAAGAGGACACGACGATTGAAATCGACAGAATCTCGATTTCCGATTCCCACACCTCGTGGATTCCCGGCAAACGGCATTTCGATGAGGATGATGGTTCCATATCGTGGAGGAAGAGGAAGAAGCATTTCTTCGTTCTCAGTCATTCCGGTAAACCTATATATTCCAGGTATGGAGATGAACACAGACTTGCCGGGTTTTCGGCAACTTTGCAAGCAATCATTTCCTTTGTTGAGAATGGGGGCGACTCTGTTAAATTGGTGAGGGCTGGAAGGCATCAGGTGGTTTTTCTCGTGAAAGGACCAATTTACTTAGTCTGCATCAGTTCCACAGAAGAACCGTACGAGTCATTGAGGGGGCAGTTAGAGCTAATTTATGATCAGATGCTTGTTATACTAACAAAATCAATAAATAGATGTTTTGAGAAGAATCCAAAATTTGATATGACACCTTTGCTTGGTGGAACAGAAGTTGTCTTCTCTTCTCTAATACACTCTTTCAGCTGGAACCCAGCTACATTTCTTCATTCCTATACTTGTCTCCCTCTTGCATATGCAACAAGGCAAGCTGCAGGAGCTATTTTGCAAGATGTTTCTGATTCAGGTGTTTTGTTTGCAATACTGATGTGCAGGCACAAGGTAATCAGTCTTGTCGGTGCTCAGAAAGCTTCCCTTTATCCTGATGATATGCTGCTGCTGGCCAACTTTGTCATGTCATCTGAATCCTTCAGGACGTCGGAATCATTTTCTCCAATTTGCTTGCCAAGATATAATCCTTCAGCATTTTTATATGCATATATCCATTACTTTGATGCAGACACATACTTGATGTTGCTAACCACTAGTTCTGATGCATTTTATCATCTCAAGGATTGCAGGATTCGTGTTGAAAATGTTCTTTTGAAATCAAGTGTCCTTAGTGAGGTTCAGAGATCCTTGTTAAACGGGGGAATGCATGTTGAAGATCTGCCACCTATATCTCATTCTGGATCGTCACATTTGGGCCAGCACATGCTTCCGTCAGATTCTCCTGACAGATTTAGGGAAGCTAATTTTGGCATTGGAGGTCCTGCTGGGTTGTGGCATTTCATATACCGCAGTATATATCTGGACCAGTATGTTTCTTCAGAGTTCTCGTCATCAATTAATACGCCTCAGCAGCAAAAAAGACTTTATAGAGCTTACCAGAAACTTTTTGCATCCATGCATGATAAAGGAATTGGGCCACACAAAACTCAATTTAGAAGAGATGAAAACTACGTTCTTCTCTGTTGGGTGACACAGGATTTTGAGCTGTATGCTGCCTTTGATCCCCTTGCAGACAAGGCCTTGGCAATCAAGACTTGCAACCATGTTTGTCAGTGGATAAAAGATGTGGAAAATGAAATATTTTTGCTAGGAGCTAGCCCCTTTTCATGGTGA	1884	0.4337	MKVKEVIEDTMEIEGATKGEGEKEEEESFHKREKMFKAFKRPNILFSIARGVVERQGYAFFVDIEYERLPYLYPAETSRDWQSNNNLLQNPNHLSLSTIITMTDDETESEGEIMASVKPASEDAPSSPGSSGYAGEGGSTSATTGSQFELEREEIEEDTTIEIDRISISDSHTSWIPGKRHFDEDDGSISWRKRKKHFFVLSHSGKPIYSRYGDEHRLAGFSATLQAIISFVENGGDSVKLVRAGRHQVVFLVKGPIYLVCISSTEEPYESLRGQLELIYDQMLVILTKSINRCFEKNPKFDMTPLLGGTEVVFSSLIHSFSWNPATFLHSYTCLPLAYATRQAAGAILQDVSDSGVLFAILMCRHKVISLVGAQKASLYPDDMLLLANFVMSSESFRTSESFSPICLPRYNPSAFLYAYIHYFDADTYLMLLTTSSDAFYHLKDCRIRVENVLLKSSVLSEVQRSLLNGGMHVEDLPPISHSGSSHLGQHMLPSDSPDRFREANFGIGGPAGLWHFIYRSIYLDQYVSSEFSSSINTPQQQKRLYRAYQKLFASMHDKGIGPHKTQFRRDENYVLLCWVTQDFELYAAFDPLADKALAIKTCNHVCQWIKDVENEIFLLGASPFSW	627

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Spst11g01354	627	Pfam	First Longin domain of FUZ, MON1 and HPS1	196	317	IPR043972	GO:0016192
	Spst11g01354	627	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	401	424	IPR004353	GO:0006623
	Spst11g01354	627	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	576	590	IPR004353	GO:0006623
	Spst11g01354	627	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	299	311	IPR004353	GO:0006623
	Spst11g01354	627	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	592	605	IPR004353	GO:0006623
	Spst11g01354	627	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	605	625	IPR004353	GO:0006623
	Spst11g01354	627	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	196	213	IPR004353	GO:0006623
	Spst11g01354	627	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	429	455	IPR004353	GO:0006623
	Spst11g01354	627	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	352	365	IPR004353	GO:0006623
	Spst11g01354	627	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	214	234	IPR004353	GO:0006623
	Spst11g01354	627	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	248	262	IPR004353	GO:0006623
	Spst11g01354	627	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	328	349	IPR004353	GO:0006623
	Spst11g01354	627	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	376	392	IPR004353	GO:0006623
	Spst11g01354	627	PANTHER	SAND PROTEIN-RELATED	103	625	IPR004353	GO:0006623
	Spst11g01354	627	MobiDBLite	consensus disorder prediction	123	148	-	-
	Spst11g01354	627	Pfam	Second Longin domain of FUZ, MON1 and HPS1	357	449	IPR043971	GO:0016192
	Spst11g01354	627	MobiDBLite	consensus disorder prediction	1	28	-	-
	Spst11g01354	627	MobiDBLite	consensus disorder prediction	105	160	-	-
	Spst11g01354	627	Pfam	Third Longin domain of FUZ, MON1 and HPS1	513	614	IPR043970	GO:0016192

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Spst11g01354	Spst-Chr11	38046132	38058758	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Spst11g01354	K20195		-	mof:131149206	847.04

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Spst5g00549	5	4473710	4479202	Spst11g01354	11	38046132	38058758	PCT