Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00530 ATGGCTACTAAAATGGAGAAGTTTGCTACCATGGTTTTGATTTGCTGTTTACTTTTATTCTTCTCTTTACCAGTGATGTCTCGAGAAGTTGAAGATGAGAGTGAGTTTAATTACGATGAAGAGAGCGAGAATGGACCCTCTCATTGGGGAGAATTACACCCTGAGTGGAGTTTGTGTAACAATGGATCCATGCAGTCACCAATTGATCTATTGAATGAGAGGGTTGAAATAGTATCCCATCTAGGGAGGCTTCAGATGAAATACCAACCCTCCAATGCCACTATTAAGAATAGGGGCCACGATATCAAGCTCGATTGGGCTGCTGGTGCAGGTTTTCTTCAGATTAATGAAACTAAGTATGTACTCAACCAATGTCATTGGCATTCTCCCTCTGAACACACCATAGATGGCCAAAGGTTTGATCTAGAGTTACACATGGTGCACGAATCTCCTTCTGGACAAACAACTGTTATAGGAATACTGTACAAGATTGGAGGACCAGATTCTTTCCTTTCATCGTTAACAAGTCATTTAAAGGCCATTTCTGATAAGACTGAAGCAGAAAGAGTGGTGGGTGTGGTTGACCCTAGGCAAATCAAAATTTTCTACAAGCAGTATTACAGGTACATGGGTTCGCTGACTATTCCTCCTTGCACTGAGAATATTTCTTGGACCATCGTTAGAGAGATACAATCGGTTTCAAAGGAACAGGTTGAATTGCTCCGAGTCGCAGCTCATGATGAATCAGATACAAACGCAAGGCCACTGCAACTAATAAACAACCGCTTGCTGCAACTTTATAGGCGACAATATTATTAA 819 0.4139 MATKMEKFATMVLICCLLLFFSLPVMSREVEDESEFNYDEESENGPSHWGELHPEWSLCNNGSMQSPIDLLNERVEIVSHLGRLQMKYQPSNATIKNRGHDIKLDWAAGAGFLQINETKYVLNQCHWHSPSEHTIDGQRFDLELHMVHESPSGQTTVIGILYKIGGPDSFLSSLTSHLKAISDKTEAERVVGVVDPRQIKIFYKQYYRYMGSLTIPPCTENISWTIVREIQSVSKEQVELLRVAAHDESDTNARPLQLINNRLLQLYRRQYY 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00530 272 SMART Carb_anhydrase_2a 38 268 IPR001148 -
Spst5g00530 272 FunFam Alpha carbonic anhydrase 3 33 271 - -
Spst5g00530 272 ProSitePatterns Alpha-carbonic anhydrases signature. 131 147 IPR018338 GO:0004089|GO:0008270
Spst5g00530 272 CDD alpha_CA_prokaryotic_like 45 263 IPR041891 -
Spst5g00530 272 Gene3D Alpha carbonic anhydrase 32 271 IPR036398 -
Spst5g00530 272 SUPERFAMILY Carbonic anhydrase 35 263 IPR036398 -
Spst5g00530 272 Pfam Eukaryotic-type carbonic anhydrase 44 264 IPR001148 -
Spst5g00530 272 ProSiteProfiles Alpha-carbonic anhydrases profile. 34 268 IPR001148 -
Spst5g00530 272 PANTHER CARBONIC ANHYDRASE 33 262 IPR023561 GO:0004089|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00530 Spst-Chr5 4234999 4237028 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00530 K01674 - gmx:100810249 479.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00530 5 4234999 4237028 Spst5g00530 5 4234999 4237028 ECH
Spst11g01331 11 37822860 37825058 Spst5g00530 5 4234999 4237028 PCT