Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01331 ATGGAAAATCTTACCAAGCAAGCTCTGATTTGCAGTTTATTAACAGCACTTGTTTTGTTATCATGTCCAGTAGCTATGTCTCAAGAAGTTGATAACGAGTCCGAGTTTACTTATAATACGAATGACAAGACAGGACCAGATAACTGGGGTGATATAAAATCTGAATGGAGTCTATGCAAAAAGGGATCCCTGCAATCCCCGATTTCTTTGTTGAATGGTAAGGTTCGAAGAGTTACCAATTTGGGGGAACTTAAGATCAGCTATAAACCAACCAAAGCAGATATCATGAATAGGGGCCACGATATCAAGTTACACATGCTGCACCAAGCTCCATCAGGACAAATTGCAGTGTTTGGAATTGTTTATAGGGCTGGACTTCCAGATCCTTTCTTGTCATTGGCCATTTCTAGTAACATTGGAGCAAAAAGAGATGTGGGTGATCTGGATCCTAATCTGGTTATAAAAGGCGCAAGCATAGCAATGTATTACAGATATATTGGTTCCCTGACTACTCCTCCATGCTCTGAGAATGTTACTTGGATCTTGCTTAGAGAGGTGAGAGCCATTTCTCAGGAACAAATCACATTGCTTCGAGAGGCCGTTCATGATCATTCAAGTACCAATGCAAGACCATTGCAACCATTAAACGATCGCTTAGTGGAGTTCAACGATCCCTGA 678 0.4115 MENLTKQALICSLLTALVLLSCPVAMSQEVDNESEFTYNTNDKTGPDNWGDIKSEWSLCKKGSLQSPISLLNGKVRRVTNLGELKISYKPTKADIMNRGHDIKLHMLHQAPSGQIAVFGIVYRAGLPDPFLSLAISSNIGAKRDVGDLDPNLVIKGASIAMYYRYIGSLTTPPCSENVTWILLREVRAISQEQITLLREAVHDHSSTNARPLQPLNDRLVEFNDP 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01331 225 CDD alpha_CA_prokaryotic_like 45 222 IPR041891 -
Spst11g01331 225 Gene3D Alpha carbonic anhydrase 100 224 IPR036398 -
Spst11g01331 225 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Spst11g01331 225 Pfam Eukaryotic-type carbonic anhydrase 142 222 IPR001148 -
Spst11g01331 225 PANTHER CARBONIC ANHYDRASE 33 103 IPR023561 GO:0004089|GO:0008270
Spst11g01331 225 SUPERFAMILY Carbonic anhydrase 36 222 IPR036398 -
Spst11g01331 225 SMART Carb_anhydrase_2a 38 224 IPR001148 -
Spst11g01331 225 Gene3D Alpha carbonic anhydrase 32 99 IPR036398 -
Spst11g01331 225 ProSiteProfiles Alpha-carbonic anhydrases profile. 1 224 IPR001148 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01331 Spst-Chr11 37822860 37825058 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01331 K01674 - gmx:100811978 273.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00531 5 4249473 4258122 Spst11g01331 11 37822860 37825058 PCT
Spst11g01331 11 37822860 37825058 Spst5g00530 5 4234999 4237028 PCT