Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00442 ATGACTGAGAATAAAGCATACAAAGATCTGCTAATTGAATTTCATCCTAAAAATTTTGTTAAGAGAAATTATGGACAGCTCATTTTGCTGCTGCGTGGCCGCTTTGGAAGTAGTGTTGTGGGTCGTACCACGTTGTTTTTACTTAAAGTTGCTGCTTTAGAGATCATAAGGAGGTTCTCCAAGAGCAAATGTCCATGTCTATGGCGAGGCCTTCAAGCACTACAAATTTTATGTTATCCACCTTTTAAATGGATTCAGAGGTGGGCGCCCTTCAAGGGTTTGGTTGACAACATGCAGGTCCTATCAAAACCGTTGCTAGCCCTTTCAATTGCAACGTTGTTTTCTGATCAGTCAATTACAATGTTGCTTTCTGATAAATCAAAATGTAGTGATAGAAAGTCTGATTTAAGTTCTGATTCAGAAGATGCAGTAGTATACTCTGGATTATCTCCTTTACAGGTTGATTTGAATATAAGCCAGTGTTTGACAAATCCTAAAATTTTAGAACCTGAGAAGTGGTTGACTCAACTCAATCAAGAGCTTGAAAATCAAGGACTTAGTTTACCCGAAAGAATCAACGAAGACGAGCTTCGGAGATTTTATGCAGCTTCTAATAATGATTTTTCATGCTTCCTTACCTCAATAAAGAAAACCATACGATGGAGAGAGACTTACAGAATTCTTTCTGAGGAAGAACTGAAAATGTGGACAAAGATGGTGTTTTGGCATGGGTGTGATGTGGAGCACAGACCTTGCCTAATTGTTAGGCTTGGGTCAGCCTACAATACTTTGACATCCGAGGATAGACCTCGATTTGCTCAGGCAGTCATATCACAGGTAGAATATGGAGTCTTGCACTTGGTTGATGCAAATAATCCTCAAATTACAGTGTTGGTGGATTTTGAAGGGCTATCTCCAGTGAGAATTCCCATGCAAATAATGAGATCTTGTTCTTCCCTTCTGCTAGACCACTTTCCCAATCGTCTTGGTTGCATGTTTGTCATACAACTGCCAGCCAGTGTTCAAGTTATTGCCCAGACTTTTATTCAGGATTTGAAACCTGCAACTAGAAACAAGTTGAAAATGGTACGGGAAATGTATCAGAAAGTTCTTTCTGACTCTCTGCCCAACCTGCCTTCATATCTTGGAGGCTGCTGCACTTGCATGAAATGCTCTAACATTGGCCAGCGGGATATGCTGCAACCTTATGCAGCTGGGACCAGCAGGAGAGACAAGGTGGAGGACACCGGTGACAGTGACAGTGATAACGAGGATCCTCCAACATTGCATCCTTCCAATGAATTAGAAGGCCACTTGTATGGCCGATATGACCAGTTATTGAGAACTGCTATCGTTGGTATTCTTATATTTTGGACTTTTGTAGCTCTTGGTGCTGTAGTATTTGATTCCAGTAATAGTCACCTGCCTTGA 1431 0.4109 MTENKAYKDLLIEFHPKNFVKRNYGQLILLLRGRFGSSVVGRTTLFLLKVAALEIIRRFSKSKCPCLWRGLQALQILCYPPFKWIQRWAPFKGLVDNMQVLSKPLLALSIATLFSDQSITMLLSDKSKCSDRKSDLSSDSEDAVVYSGLSPLQVDLNISQCLTNPKILEPEKWLTQLNQELENQGLSLPERINEDELRRFYAASNNDFSCFLTSIKKTIRWRETYRILSEEELKMWTKMVFWHGCDVEHRPCLIVRLGSAYNTLTSEDRPRFAQAVISQVEYGVLHLVDANNPQITVLVDFEGLSPVRIPMQIMRSCSSLLLDHFPNRLGCMFVIQLPASVQVIAQTFIQDLKPATRNKLKMVREMYQKVLSDSLPNLPSYLGGCCTCMKCSNIGQRDMLQPYAAGTSRRDKVEDTGDSDSDNEDPPTLHPSNELEGHLYGRYDQLLRTAIVGILIFWTFVALGAVVFDSSNSHLP 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00442 476 MobiDBLite consensus disorder prediction 408 431 - -
Spst5g00442 476 Pfam CRAL/TRIO domain 237 384 IPR001251 -
Spst5g00442 476 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 230 390 IPR001251 -
Spst5g00442 476 SMART sec14_4 234 387 IPR001251 -
Spst5g00442 476 CDD SEC14 230 384 IPR001251 -
Spst5g00442 476 Gene3D - 168 417 IPR036865 -
Spst5g00442 476 MobiDBLite consensus disorder prediction 405 434 - -
Spst5g00442 476 PANTHER SEC14 CYTOSOLIC FACTOR FAMILY PROTEIN / PHOSPHOGLYCERIDE TRANSFER FAMILY PROTEIN 4 464 - -
Spst5g00442 476 SUPERFAMILY CRAL/TRIO domain 237 389 IPR036865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00442 Spst-Chr5 3486614 3489430 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00442 - - gmx:100786215 741.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00442 5 3486614 3489430 Spst5g00442 5 3486614 3489430 ECH
Spst5g00442 5 3486614 3489430 Spst2g02286 2 22049178 22058628 PCT