Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02286 ATGCCTTCAGTTTACATGGGAGATAGGGTGGATAATTCTACGTCGAGCATGGGAACTAATTCTAAAGAAAGCAGTGTTGTCACTGGGAAAAAAACATACAAAAACCTTCTGGTTGCCTCACGACCTAAAGGTTTTGCACAGAGAAATTATGAACAACTTGTGTCATTAACCTATGGTGACTTTGGAAGCAGTGCTGTGGGTCGTGTCACTTTTTTTTTACTCAAAGTTGCTGCATTAGAGACTGTGAGGAGGTTCTCCAAGAGTAGATGCCCGTGTGTATGGCGAGGCCTGCAGGGTTTACAGATCTTTGTCTATCCACCATTCAAATGGATTCAGAGATGGGCACCCTTCAGGGGTTTGGTGAAGAGCATGCAGGTACTATCAAGACCACTTTTATTTCTATCAATTGCAACAGTTGTTACTGATCAACCCGAATGTAGTGATGGAACCTCAGATTGTGTTGTTGATTCTCCTGATTCTGAAGAATCTCCCGAACTATCTCCTGCACAAGCTAACTTCAATACAAGTCAGTGTGAGATAGATCCTGAAGTTTTAGAATACGAAAACTGGTTGACTCTACTTAATCAAGAACTGGAAAATCAAGGGATTAGTTTGCCAGAAAGAATCAATGATGATGAGCTCCACAGATTTTACACAGCTTCTAATAATGACTTTTCATGCTTCCTTACCTCAATCAAGAAGACAATACTGTGGCGGGAGAATTACAGATTTCTTTCAGGAGAAGAGCTGGAAATCTGGTCAAATATGGTGTTCTGGCATGGATTTGATGTTTTGCACAGACCTTGCCTCATTGTAAGGCTTGGGATAGCCTGTCGCTCTTTGGCCTCTGAAGATAGACTTCATTTTGCTCAGGCAGTTATATCACAGGTAGAATACGGAGTCTTGCACTTGCTAGATGCAGACCACCCTCAAATGGCAGTATTGGTGGACTGTGAAGGGTTATCTCCATTGAGAATTCCCATGAAAATGATGAGAACTTGTTCATCCCTTCTGCAAGATTACTTTCCAAATCGACTTGGTTGTTTGTTTGTCATCCGACTGCCAGCAATTGTTCGTGTTATTGCCCAGACTTTTATTCAGGTTTTGAAGCCAGCTACTAAGAAGAAGTTGAAGATAGGGGGGGAGATATATCGGAAAGTACTTTTTGAAAATTTTCCAACACCACCATCATATCTTGGAGGAAGCTGCACTTGCATGAAATGTTCTAAAATTGGCAACTGGAATATGCTGCAACCTCATTCAACTGGGACGAGCAGAATTGATAGGGAGCAGGATATCAGTGACAATGGGGGTTTGCCATCATCACTGCATCCATCTAACGAATTAGATGAGCTTCAAGTCAGCAATTCTGACCAGCTGTTGAGAAAGGCTGTCATAAGTTTTCTCGTATTTTGGGTTTTCGTAGCTCTTGGTGCTGGAATTTACGATCCTGGTAGTCGCCGCTTAGCCCCATAG 1476 0.4228 MPSVYMGDRVDNSTSSMGTNSKESSVVTGKKTYKNLLVASRPKGFAQRNYEQLVSLTYGDFGSSAVGRVTFFLLKVAALETVRRFSKSRCPCVWRGLQGLQIFVYPPFKWIQRWAPFRGLVKSMQVLSRPLLFLSIATVVTDQPECSDGTSDCVVDSPDSEESPELSPAQANFNTSQCEIDPEVLEYENWLTLLNQELENQGISLPERINDDELHRFYTASNNDFSCFLTSIKKTILWRENYRFLSGEELEIWSNMVFWHGFDVLHRPCLIVRLGIACRSLASEDRLHFAQAVISQVEYGVLHLLDADHPQMAVLVDCEGLSPLRIPMKMMRTCSSLLQDYFPNRLGCLFVIRLPAIVRVIAQTFIQVLKPATKKKLKIGGEIYRKVLFENFPTPPSYLGGSCTCMKCSKIGNWNMLQPHSTGTSRIDREQDISDNGGLPSSLHPSNELDELQVSNSDQLLRKAVISFLVFWVFVALGAGIYDPGSRRLAP 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02286 491 CDD SEC14 248 379 IPR001251 -
Spst2g02286 491 MobiDBLite consensus disorder prediction 8 25 - -
Spst2g02286 491 SMART sec14_4 251 404 IPR001251 -
Spst2g02286 491 Gene3D - 186 453 IPR036865 -
Spst2g02286 491 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 259 407 IPR001251 -
Spst2g02286 491 MobiDBLite consensus disorder prediction 421 440 - -
Spst2g02286 491 MobiDBLite consensus disorder prediction 1 25 - -
Spst2g02286 491 PANTHER SEC14 CYTOSOLIC FACTOR FAMILY PROTEIN / PHOSPHOGLYCERIDE TRANSFER FAMILY PROTEIN 17 484 - -
Spst2g02286 491 SUPERFAMILY CRAL/TRIO domain 254 406 IPR036865 -
Spst2g02286 491 MobiDBLite consensus disorder prediction 146 170 - -
Spst2g02286 491 Pfam CRAL/TRIO domain 255 392 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02286 Spst-Chr2 22049178 22058628 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02286 - - gmx:100814843 853.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00442 5 3486614 3489430 Spst2g02286 2 22049178 22058628 PCT