Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00431 ATGGGGTTATTACCTCCAACTCAAGAAGATTTGAAGGAGCTGATTCAGTTTAGATATGTTATGCCACTCCTGTTGAACAAAAAAATGAGCACACCGTTGTTCCATGATTTTAAAAAGCAAGCTTCTTTCTTCCTCAAGCAAAAATTCAAGACTGCTAGGTTAGCTCTCACTAATGTTACCCCTGCAGAATTGATGACAGAAGAAGTTACCAAAGGAAATTCATTGGTCCCAGATTCCCCGACACTGAGATCAATTTCAAGGGCTGCTTTTGAGCTTGAAGATTATTGGAGGATTGTAGAGATTCTACACAAAAGACTCTTCAAATTTGACAAGAATAATTGGAGGGCATCTTACAATTCTCTGATTGTGGTGGAGCACCTGTTGACTCATGGACCAGAAAGTGTTGCAGAGGAATTTCAGAGTGACAAAGATGTAATTAACCAGATGAAAGGCTTTCAGTTTACTGATGACACTGGGTTCAATTGGGGTCTAACTGTTAGAAAGAAATCAGAACGGATTTTGAAACTGCTGGAAGATGGAAGTCTCCTTAAGGAAGAAAGAGACCGTGCTCGGAGGTTGTCCAGAGGAATTCAAGGTTTTGGAAGTTTCAGCCAACGGTCAACTCAAGCACAACGAGTTATGCATGAAAAATCATTGCCAGCCACGTTTGACCGCTCTAACTCTGACGTCAACAGCAATGACAATCAGGAAAACCAGTCTTTTGGCTCAAACCATTTTCTGGACACAGCAGTAGTTAAATATTCTTGTACTAGTCATGAGGGAGGAATTTTCGACTCTCAAGATGATCGTGTAGAGCCTGAGAGCCACTCGGATGATCAGGGAAACACTCAAATGCATCAGAACTCTGAAACAAGCTCTGCAGAAATCATGACACCTAGCAAGGAGGAATTCCATCTATGGAACTTGAAAGGGGAATCCAATCCACTCTTGGATGGTAGCCAAGAGAATGAATCCAGACTTGGGATATTCACAGCCGAAGATGATCACCCCTTTAACTTCACAGAAATGCATTCCACTTCTTCCCTTCTTTCTTCCAGATGA 1062 0.4181 MGLLPPTQEDLKELIQFRYVMPLLLNKKMSTPLFHDFKKQASFFLKQKFKTARLALTNVTPAELMTEEVTKGNSLVPDSPTLRSISRAAFELEDYWRIVEILHKRLFKFDKNNWRASYNSLIVVEHLLTHGPESVAEEFQSDKDVINQMKGFQFTDDTGFNWGLTVRKKSERILKLLEDGSLLKEERDRARRLSRGIQGFGSFSQRSTQAQRVMHEKSLPATFDRSNSDVNSNDNQENQSFGSNHFLDTAVVKYSCTSHEGGIFDSQDDRVEPESHSDDQGNTQMHQNSETSSAEIMTPSKEEFHLWNLKGESNPLLDGSQENESRLGIFTAEDDHPFNFTEMHSTSSLLSSR 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00431 353 MobiDBLite consensus disorder prediction 280 296 - -
Spst5g00431 353 ProSiteProfiles ENTH domain profile. 54 187 IPR013809 -
Spst5g00431 353 SMART enth_2 60 187 IPR013809 -
Spst5g00431 353 Pfam ENTH domain 60 182 IPR013809 -
Spst5g00431 353 PANTHER EPSIN/ENT-RELATED 39 286 - -
Spst5g00431 353 MobiDBLite consensus disorder prediction 221 243 - -
Spst5g00431 353 CDD ENTH 62 179 - -
Spst5g00431 353 Gene3D - 56 203 IPR008942 -
Spst5g00431 353 MobiDBLite consensus disorder prediction 263 279 - -
Spst5g00431 353 MobiDBLite consensus disorder prediction 262 296 - -
Spst5g00431 353 SUPERFAMILY ENTH/VHS domain 40 187 IPR008942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00431 Spst-Chr5 3393686 3395735 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00431 K12471 - gmx:100812797 511.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00431 5 3393686 3395735 Spst2g02304 2 22349244 22351392 PCT