Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02304 ATGAAGCATGGTTCTCTGGACATAACCTTGGTTCAACTACCATCGTTGAACAAAATTAGAAGCAGCAAAATGAGCACGCCCTTGTTCCATGAATTCAAAAAGCAAGCTTCTTTCTTCCTCAAGGAGAAAATCAAGACTGCTAGATTAGCTCTAACAGATGTCACCCCTGCAGAGCTGATGACAGAAGAGGCAACTAGTGGAAATCCATGGGCCCCAGATTCCAGAACACTCAGATCAATTTCAAGGGCTGCTTTTGAGTTAGATGATTATTGGAGGATTGTGGAGATTCTGCATAAAAGGTTCCTGAAATTTGAAAAGAAGAATTGGAGGGTCTCTTACAATTCCCTGATCGTGCTTGAACACCTGTTGACTCATGGACCAGAGAGTGTTGCTGAGGAATTTAAGAGTGACAAAAATGTTATTAGTCAGATTAAAAGTTTTCAGTTTATTGATGACACTGGGTTTAATTGGGGCTTAACCGTCAGAAAGAAATCCGAGAGGATAGTGAATCTTATGGAAGAAATAACTCTTCTCAAGGAAGAGAGAAAACAAGCTAGAAGGTTATCGAGAGGAATTGAAGGTTTTGGAAGTTTTCCCCATCGGTCAACTCCAGCACAATGTATTCTACGTGAGAAATCAATGCCAACCACACTTAAGAGGTATGACTCAGATTTGAACAACCATGAAGATCAGGAAAACAAGTCCTCTTGTTCAAACAATGGTGTGGATGTGGACACAGTGGCCGTGAAATCTCCTAGCTATCAAGGTGAAACTTTCAAGTCCTTTGGTAGTGTGAAAGCCAAGGGATACCAGGATGATCTAGACAACACTCAAATGCTTCAGAAATCTGAAACAAATGCAAAAGAAAACATGGAGCCGAGCAAGGAGGAGTTCCATCTGTGGAACATGAAAGGGGAATCCAAACCACTTTTGGATTGTGGTGAGGAGGATTCCAAGCTTGGAATCATCAGAACAGAAGATGATCATCCCTTTAGTTCAAATGAAATGCATGGCACTGCCTCCCTGCTTTCTGCTAGAGACGGAATACTACAAGGGTGTTGA 1062 0.4171 MKHGSLDITLVQLPSLNKIRSSKMSTPLFHEFKKQASFFLKEKIKTARLALTDVTPAELMTEEATSGNPWAPDSRTLRSISRAAFELDDYWRIVEILHKRFLKFEKKNWRVSYNSLIVLEHLLTHGPESVAEEFKSDKNVISQIKSFQFIDDTGFNWGLTVRKKSERIVNLMEEITLLKEERKQARRLSRGIEGFGSFPHRSTPAQCILREKSMPTTLKRYDSDLNNHEDQENKSSCSNNGVDVDTVAVKSPSYQGETFKSFGSVKAKGYQDDLDNTQMLQKSETNAKENMEPSKEEFHLWNMKGESKPLLDCGEEDSKLGIIRTEDDHPFSSNEMHGTASLLSARDGILQGC 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02304 353 Coils Coil 161 188 - -
Spst2g02304 353 ProSiteProfiles ENTH domain profile. 49 182 IPR013809 -
Spst2g02304 353 SMART enth_2 55 182 IPR013809 -
Spst2g02304 353 SUPERFAMILY ENTH/VHS domain 35 182 IPR008942 -
Spst2g02304 353 Pfam ENTH domain 55 174 IPR013809 -
Spst2g02304 353 CDD ENTH 57 173 - -
Spst2g02304 353 Gene3D - 51 198 IPR008942 -
Spst2g02304 353 PANTHER EPSIN/ENT-RELATED 34 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02304 Spst-Chr2 22349244 22351392 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02304 K12471 - gmx:100811093 586.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00431 5 3393686 3395735 Spst2g02304 2 22349244 22351392 PCT