Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00401 ATGCCCAAACATATTGATACTACAACAAGAAGTCCTACCAATGTTGCTAGCGTGGAACAATTCCTCCGAGGTTCAGGAGGGGATTGTTCTAGGATGTCACCAACCTACTCTCCCACCTCCAATTCCCCTTCCTCTCCTTACTCTGACAAGATGAAGCATCAGGACCAGGAAGAAGACCACGGCCTCAATCAGAAGAAATCAGTCCTCAACAAAGTGAAGGAAAAGGCCAAGAAATTATGCAGCAGCCTCAGCAAGAGAAGAATGGAGGACGAGAATGTCACTCCCTCTTGGGGTGTTAAGTTAGAAGATGACGAGCAAGAAGAAGACGACGCTGAATACCTTGGAGCTCCTATGTATGAATCTGAGCTAGCACCTGACGCATACAAAGAAAATGCAAGGCAACATCCAAGAGCAAATCCAGTAATCTCTGAGAATCATGTTCTGCATAACACTGTCAGACTAGAAGGGCAGCACGATCGAGAAAAGCCACGTGCTACTATGAATCTCAAGTGCACTTCAACAACGCAACCTGATAATACAACAACAAAAACAAAAAATCTAACTCCAAACATGGCCTCTGAAACCTTAGCTCAGAAACAGATGCCTGCCTATGCTGGAGGGTCGCTTGCAGCCAATTCAATATCCTCCAAAAATCAAGTTGCAGTTTCCAAAAATCATCTTACAACCAACAGCATGCCCTCCCGAAATACATCAGTTTCACCATCCCAGATGCAAAATTCACTATCCTCATCTGCTTCACATAGTGGGAAGAATTCAAGCCAAAATGGTGCTTCAGTAAAAGATTATTTGATGAGCAAGTCGGAACTAGAGAATGATGCCAAAACTTTGTCTCCAATGCAAGATTTATCATCTTCATCTGCTTCACTGAGTGGGAAGATTACACAAAGGTGTGCTTCAGCCAAATATTATTCGATGAACAGATCTGAACAAGTGGATGATGCCAGAACTATGACTCCATTGCAAAAATCATCATCCTTATCCGCTTCTTCACTGAGGGGGAGAAACACAACCCAAAGGAGTGCTTCAGCTAAAGACTATTCAATGGGCAAGTCTGAGCCAAGGGATGATGAAAAAACTGCTTCTCGGCTTCAGATGATATCTGAAGGAACGGGTCCAAAAAGAACCTCTAGTAATGCAGGTATGATGGAGAAGGTGAGAGGAGCTGTAAATTCATTTCTCGGGAATGAGGATTCATCACAAGAATATGGAGTCAACTGTCCTACTACACGCACTTCATCACAAACTCAACAAGTTGGTCAGGATGAGAACCGTGGGAGAATTCTACAGGCAAATTAA 1317 0.4343 MPKHIDTTTRSPTNVASVEQFLRGSGGDCSRMSPTYSPTSNSPSSPYSDKMKHQDQEEDHGLNQKKSVLNKVKEKAKKLCSSLSKRRMEDENVTPSWGVKLEDDEQEEDDAEYLGAPMYESELAPDAYKENARQHPRANPVISENHVLHNTVRLEGQHDREKPRATMNLKCTSTTQPDNTTTKTKNLTPNMASETLAQKQMPAYAGGSLAANSISSKNQVAVSKNHLTTNSMPSRNTSVSPSQMQNSLSSSASHSGKNSSQNGASVKDYLMSKSELENDAKTLSPMQDLSSSSASLSGKITQRCASAKYYSMNRSEQVDDARTMTPLQKSSSLSASSLRGRNTTQRSASAKDYSMGKSEPRDDEKTASRLQMISEGTGPKRTSSNAGMMEKVRGAVNSFLGNEDSSQEYGVNCPTTRTSSQTQQVGQDENRGRILQAN 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00401 438 MobiDBLite consensus disorder prediction 355 369 - -
Spst5g00401 438 MobiDBLite consensus disorder prediction 228 264 - -
Spst5g00401 438 MobiDBLite consensus disorder prediction 23 110 - -
Spst5g00401 438 MobiDBLite consensus disorder prediction 399 438 - -
Spst5g00401 438 MobiDBLite consensus disorder prediction 370 384 - -
Spst5g00401 438 MobiDBLite consensus disorder prediction 316 352 - -
Spst5g00401 438 MobiDBLite consensus disorder prediction 30 49 - -
Spst5g00401 438 MobiDBLite consensus disorder prediction 316 438 - -
Spst5g00401 438 MobiDBLite consensus disorder prediction 50 101 - -
Spst5g00401 438 PANTHER LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED 300 437 IPR037491 GO:0009737
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00401 Spst-Chr5 3238302 3240353 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00401 - - vra:106758277 416.001
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00401 5 3238302 3240353 Spst2g02328 2 22699424 22701448 PCT