Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02328 ATGGCTCAACTCGAACGCCCTCAGAGACAGGTTGAAACTGCAAAAACTCCCTCTACCATCCACACCATGGAACAACTCCTCCGAGGGGAGTCTTCCAAGTCCAGTAAGCAGTCACCAGCCTTCCCCACTTCCTCCTCCGCCAACTCCTCCTCCACCAACTCCGCTTTCTTCCAAAGGCTGAGGTCCCATGACTCCGAAGACGACCATGGCCAGAATCAGAAGAAATCAGTTCTTACGAAAGTGAAGGAGAAGGCCAAGAAACTACGCCACAGCCTCAGCAAGAAAAAACATGAGGATGGGAACCTCAGTAGTCCCTCATCGGCTACTGGCGCAGAAGGTGATGGAGTAGAAGAAGATGCTGAATTTCTTGGAGCTCCTATGTACGAATCAGAGAAGGCACCTATAGGGTACAAAGCAAATGCAAAACAGCTTCTAAGTCCAAGAGTAAATCATATAATCCCTGAGAAGCATGTTATATCAAGCAATGACAAACACGTAGTGGAACAAAATAAAGAAAAGTCACTGACCCGTTCCTTATCAGCACTACCTACAACAAAAACAAGAACCACCACCACTCCATATACTACCTCTGCTACTAGTATGAATATTAACACTAATACTAATACTATTACTCCTACTCCATGTCCAATCAAGACAACCACTGAAACGGTAGCACCGAAACTGTCCCCAATTAAAGCTGAAAAACCAAATGCAGCCCATGTAAGCTCCAAATTTCAAGGTCTTAATGTGTCCAAACCCTCAGAGCTTCATGATTACCCTTCATCACCATCACCATCAACAACAACAACAACAGCAACAGTTGCACCAAAAACAACTCGCAGCACTTCTTTCTCCTATGCTGCTACTCGTACTCCCTCTCCAAGAGTAATTTCCCAATTTCCTACAATCACTCCGCGAACTACATCAGCTCCAGTGAGTCCAGCACCATCACCCGCTACTCCACAGAGTGAGAAGATCACAAGCCCCACAACGCAAATATGGGATAAGGGTGTGTCAATGAAAGAGTACTTGTTGAACAAATTGGAGCCAGGGGAAGATGAGAAGGCGCTGTCTCAGGTGATATCTGAAGCAATGAGTCCTAGGAGAACTCCTGGTGATGCAGGTGTGATGGAGAAGGTGAGAGAAGCTGTTACTTCTCTGCTCCGAACTGAGGACCCTGCAAAATATGCAGATGCAACTGCCACTAGTAATACTCCTCGTATGTCACCTAAAAGCCCAGTATCTACCAACGCTTCTCGTGCCTCATCTCAAATGCCTTCACCTTCCAATGCTTCTCGTGCTGCGTCTCAAATGCCATCATCCTCCAATGCTTCTCGTCCTTCGTCTCAAATGCCATCACCCTCCAACGCTTCTCGTGCTTCGTCTCAAATGCCATCATCTTACAATGCCTCTCGTGCTTCGTCTCAAATGCCATCATCTTCCAATGCTTCTCGTGCTTCGTCTCAGATGCCATCATCCTCCAATGCATCTCGTGCTTCGTCTCAGATGCCATCATCTTCCAATGCTTCTCGTGCTTCGACTCAGATGCTAGCATCTTCCAATGCTTCTCGTGCTTCGTCTCAAGATCCAGCATCTACCAGCATTTCTCGCACTTCTTCTCAAATCCCTGTATCTTACAACGCCCAGGAAGGTAACATACCAATACCAGTTCACTAG 1677 0.4675 MAQLERPQRQVETAKTPSTIHTMEQLLRGESSKSSKQSPAFPTSSSANSSSTNSAFFQRLRSHDSEDDHGQNQKKSVLTKVKEKAKKLRHSLSKKKHEDGNLSSPSSATGAEGDGVEEDAEFLGAPMYESEKAPIGYKANAKQLLSPRVNHIIPEKHVISSNDKHVVEQNKEKSLTRSLSALPTTKTRTTTTPYTTSATSMNINTNTNTITPTPCPIKTTTETVAPKLSPIKAEKPNAAHVSSKFQGLNVSKPSELHDYPSSPSPSTTTTTATVAPKTTRSTSFSYAATRTPSPRVISQFPTITPRTTSAPVSPAPSPATPQSEKITSPTTQIWDKGVSMKEYLLNKLEPGEDEKALSQVISEAMSPRRTPGDAGVMEKVREAVTSLLRTEDPAKYADATATSNTPRMSPKSPVSTNASRASSQMPSPSNASRAASQMPSSSNASRPSSQMPSPSNASRASSQMPSSYNASRASSQMPSSSNASRASSQMPSSSNASRASSQMPSSSNASRASTQMLASSNASRASSQDPASTSISRTSSQIPVSYNAQEGNIPIPVH 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02328 558 MobiDBLite consensus disorder prediction 1 116 - -
Spst2g02328 558 MobiDBLite consensus disorder prediction 251 310 - -
Spst2g02328 558 Coils Coil 78 98 - -
Spst2g02328 558 MobiDBLite consensus disorder prediction 362 558 - -
Spst2g02328 558 MobiDBLite consensus disorder prediction 397 548 - -
Spst2g02328 558 PANTHER LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED 43 417 IPR037491 GO:0009737
Spst2g02328 558 MobiDBLite consensus disorder prediction 251 330 - -
Spst2g02328 558 MobiDBLite consensus disorder prediction 60 79 - -
Spst2g02328 558 MobiDBLite consensus disorder prediction 9 59 - -
Spst2g02328 558 MobiDBLite consensus disorder prediction 187 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02328 Spst-Chr2 22699424 22701448 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02328 - - var:108319604 510.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00401 5 3238302 3240353 Spst2g02328 2 22699424 22701448 PCT