Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00370 ATGGGTGGTGTTAGGTTTATGACGGTGCTAGTGGCGTTATTCATGACACTGAGCTCCGGCGTGTGGTCGTGTCCTCCGTCGGACAGGGCGGCGCTCCTGGAATTCAAGGCGGCGCTCCACGAACCCTACCTTGGAATTTTCAACTCGTGGACCGGCGCTGACTGCTGCCACAACTGGTACGGCGTGAGCTGCGACCAGGAGACCCGCCGCGTCGCGGACATTAACCTCCGCGGCGAGTCGGAGGAGCCGATCTTCGAACGAGCACACCGGACCGGGTACATGACCGGCTACATCTCTCCGGCGATATGCAAGCTCGCGCGTCTCTCCAGCATCACCATCGCCGACTGGAAGGGAATCACCGGAGAGATCCCGCGCTGCATCACAACGCTACCGTTCCTCCGCATCGTCGACCTCATAGGAAACCGCATCTCCGGCAGCATCCCCGCCGACATCGGCAGGCTCCACCGTCTCACGGTGCTCAACTTCGCCGATAACCTCATCTCCGGCACGATCCCAGCGTCGCTGGCGAACCTCACGAGTCTCATGCACTTGGATCTCCGTAACAACCTCCTCTCCGGGCCCATTCCAAGGAAGTTCGGTTCTCTCCAAATGCTGAGCCGGGCCTTGCTCAGTGGAAACCGCCTTAGTGGGCCCATTCCAGGCTCGGTTTCGCTCATTTACCGTCTGGCTGATCTGGATCTCTCCCGGAACCAACTTTCTGGGCCCATTCCGGCCTCACTTGGTAAAATGGCGGTGTTATCAACGCTTAATTTGGACTTGAATAAACTTTCTGGGCCCATTCCTGTGACCCTGTTTAGTTCGGGTCTTAGTGACCTAAACTTGAGCCGAAACGCGTTGGAGGGTAACATACCCGACGCGTTTGGTGCAAGGTCTTATTTCACTGCTCTCGATTTGTCCTATAATAATCTGAAAGGGCCCATACCCAAATCCATATCCTCTGCTTCGTTTATTGGACACTTGGATTTGAGTCACAACCACCTCTGCGGCAAGATTCCCGTTGGATCTCCGTTCGATCATCTCGAAGCGTCGTCGTTTCTGTACAACGATTGTCTCTGCGGTCAGCCACTCAAACCTTGTTACTAA 1104 0.5589 MGGVRFMTVLVALFMTLSSGVWSCPPSDRAALLEFKAALHEPYLGIFNSWTGADCCHNWYGVSCDQETRRVADINLRGESEEPIFERAHRTGYMTGYISPAICKLARLSSITIADWKGITGEIPRCITTLPFLRIVDLIGNRISGSIPADIGRLHRLTVLNFADNLISGTIPASLANLTSLMHLDLRNNLLSGPIPRKFGSLQMLSRALLSGNRLSGPIPGSVSLIYRLADLDLSRNQLSGPIPASLGKMAVLSTLNLDLNKLSGPIPVTLFSSGLSDLNLSRNALEGNIPDAFGARSYFTALDLSYNNLKGPIPKSISSASFIGHLDLSHNHLCGKIPVGSPFDHLEASSFLYNDCLCGQPLKPCY 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00370 367 FunFam Calmodulin-binding receptor kinase CaMRLK 208 316 - -
Spst5g00370 367 FunFam Leucine-rich repeat receptor protein kinase EMS1 123 207 - -
Spst5g00370 367 Gene3D Ribonuclease Inhibitor 22 90 IPR032675 -
Spst5g00370 367 FunFam Leucine-rich repeat family protein 22 90 - -
Spst5g00370 367 Pfam Leucine rich repeat N-terminal domain 26 65 IPR013210 -
Spst5g00370 367 SUPERFAMILY L domain-like 23 366 - -
Spst5g00370 367 Gene3D Ribonuclease Inhibitor 91 367 IPR032675 -
Spst5g00370 367 PANTHER DNA DAMAGE-REPAIR/TOLERATION PROTEIN DRT100 8 113 - -
Spst5g00370 367 Pfam Leucine rich repeat 275 334 IPR001611 GO:0005515
Spst5g00370 367 Pfam Leucine rich repeat 133 191 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00370 Spst-Chr5 3058826 3059929 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00370 89 366 Receptor kinase-like Gene Family AT5G46330 38.380 5.88e-47 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00370 - - gmx:100804739 676.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00370 5 3058826 3059929 Spst5g00370 5 3058826 3059929 ECH
Spst5g00370 5 3058826 3059929 Spst2g02379 2 23417206 23418300 PCT