Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02379 ATGCCTGAAATTTGGTTCACGCCGCTAATGGCGCTGTTACTACTCGCATTTTCCTCTGCAGTTCGCTCGTGTCCGCCTTCGGACCTGGTGGCGCTGCTGGCCTTCAAATCAGTTCTCCGGGAGTCTCACGGCGGAATATTCAACTCCTGGACAGGCACCGACTGCTGCCGCAACTGGCGCGGCGTCTCCTGCGACCGCAACTCTCGCCGCGTCGCGGAAATCAGCCTCCGCGCCGGTCCAGTCTACACCACGTTCGAGAAACCTTACCGTCCCGACTACATGTCCGGTTATATCTCCCCAGAGATTTGCAAGCTCACTCACCTTTCCAGCCTCATCATCACCGACTGGCACGGAATCTCCGGCGAGCTGCCTCGCTGCATCTCCTCCCTCTCCTACCTCCGCATCATCGACCTCAGCGGAAACCGCATCTCCGGCACTCTCCCCGCTGACATCGGGAAGCTTCGGCAGCTGAATCTGCTAAGCGCCGCCGATAACCTCATCGCCGGCGAAATCCCCGCGACGTTGACGAGCTTGACCGGTTTGACGCATCTGGACCTCCGTAACAACAAGATCTCCGGGCCTATCCCACAGAAATTGGGCCAGCTTCAGATGCTGAGTCGGGCCCTTTTAAGCGGAAACCAAATTAGTGGGCCTATCCCGGTTTCAATCTGTCATATATACCGTCTCGTGGATCTTGATCTGTCAAATAACCATTTATCTGGGCCCATCCCTGAAGCTTTGGGCCGAATGGCAGTTCTGTCGACGTTGAAGTTGGATACTAACAGGCTTTCTGGAAGCATACCAGCGAGCCTTTTCGGCTCGAGTATTAGTGAGTTGAACTTGAGCCACAACATGTTAGAGGGTAGTATACCCGATACGTTTGGGGGTTCATGCTATTTCACGTTACTGGATTTATCGTATAATAACCTCAAAGGCCCAATACCCAAATCCATGTCTTCTGCTTCGTACATTGGGTACGTGGAATTTAGCCACAACCACCTCTGCGGCCCAATTCCTAGCGCATACAGTAACACCGATGCGTCGTCGTTTGCTTACAACGATTGTCTTTGTGGAAAGCCACTCAAAGCTTGTTAA 1095 0.5352 MPEIWFTPLMALLLLAFSSAVRSCPPSDLVALLAFKSVLRESHGGIFNSWTGTDCCRNWRGVSCDRNSRRVAEISLRAGPVYTTFEKPYRPDYMSGYISPEICKLTHLSSLIITDWHGISGELPRCISSLSYLRIIDLSGNRISGTLPADIGKLRQLNLLSAADNLIAGEIPATLTSLTGLTHLDLRNNKISGPIPQKLGQLQMLSRALLSGNQISGPIPVSICHIYRLVDLDLSNNHLSGPIPEALGRMAVLSTLKLDTNRLSGSIPASLFGSSISELNLSHNMLEGSIPDTFGGSCYFTLLDLSYNNLKGPIPKSMSSASYIGYVEFSHNHLCGPIPSAYSNTDASSFAYNDCLCGKPLKAC 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02379 364 Pfam Leucine Rich Repeat 133 154 IPR001611 GO:0005515
Spst2g02379 364 FunFam Leucine-rich repeat receptor protein kinase EMS1 207 291 - -
Spst2g02379 364 Gene3D Ribonuclease Inhibitor 23 88 IPR032675 -
Spst2g02379 364 FunFam Nuclear pore complex protein NUP107 26 197 - -
Spst2g02379 364 Gene3D Ribonuclease Inhibitor 92 364 IPR032675 -
Spst2g02379 364 Pfam Leucine Rich repeat 181 193 IPR001611 GO:0005515
Spst2g02379 364 SUPERFAMILY L domain-like 23 339 - -
Spst2g02379 364 Pfam Leucine rich repeat N-terminal domain 26 65 IPR013210 -
Spst2g02379 364 PANTHER DNA DAMAGE-REPAIR/TOLERATION PROTEIN DRT100 11 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02379 Spst-Chr2 23417206 23418300 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02379 94 364 Receptor kinase-like Gene Family AT5G46330 36.918 1.23e-41 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02379 - - pvu:PHAVU_011G057600g 645.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00370 5 3058826 3059929 Spst2g02379 2 23417206 23418300 PCT