Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00332 ATGCAGCAGATTCTCTCTAAGACTTCATCTGCTATGGCCACTTTTCCTTGTTCCAGGGTGAAAAGTGGGTGGTGCGTGTGGCCAAATGTGAGACAACTTTGCCTTAGAAAAGGAATTCTGTATGGATTTATGCGATTGTTTTCTACACCATTGAAAACGCTGCGTGGAGCTAGTCGCACGCTGAGGGTGGGTCAGTTTTGCAGTGTTGTCAATATGTCTTCCTCGTTGCAGATTGAATTGGTACCTTGCCTGAAGGACAACTATGCGTATCTTTTACATGATGTGGATACGGGTACGGTTGGTGTTGTTGATCCTTCTGAAGCTGTGCCTATCATAGATGCCTTGAGCAGGAAAAATCGAAATTTGACATACATACTCAACACTCATCATCATCATGATCACACTGGTGGAAATGTGGAATTGAAAGCAAGATATGGAGCAAAGGTGATTGGTTCAGGAACTGACAAGAAAAGGATTCCTGGGATTGATATCTATTTGAATGATGGTGATAAGTGGATGTTTGCTGGCCATGAGGTGCGTGTAATGGACACACCTGGGCACACCCGAGGCCATATAAGCTTCTATTTTCCTGGATCTGGGGCAATTTTTACTGGAGACACTTTGTTCAGCTTATCATGTGGCAAGCTGTTTGAAGGAACCCCACAGGAGATGATGTCTTCTCTTAAAAAGATCATGTCCTTGCCAGATGATACAAATATATACTGTGGACACGAGTATACATTGAGTAATACAAAATTTGCATTGTCCATAGAGCCTGAAAACAAAGAACTTCAAGCCTATGCTGCTCATGTAGCTTACCTTCGAAGTAAAGGCTTGCCCACGATTCCCACCACACTGAAGATGGAAAAGGCTTGTAATCCATTCCTTCGAACATCCAATGCTGCAATCCGGCAATCATTAAACATTGCAACCACAGCAAATGAAGCAGAAGCCCTTGCTGTCATCAGGCAAACAAAGGATAATTTTTAG 990 0.4303 MQQILSKTSSAMATFPCSRVKSGWCVWPNVRQLCLRKGILYGFMRLFSTPLKTLRGASRTLRVGQFCSVVNMSSSLQIELVPCLKDNYAYLLHDVDTGTVGVVDPSEAVPIIDALSRKNRNLTYILNTHHHHDHTGGNVELKARYGAKVIGSGTDKKRIPGIDIYLNDGDKWMFAGHEVRVMDTPGHTRGHISFYFPGSGAIFTGDTLFSLSCGKLFEGTPQEMMSSLKKIMSLPDDTNIYCGHEYTLSNTKFALSIEPENKELQAYAAHVAYLRSKGLPTIPTTLKMEKACNPFLRTSNAAIRQSLNIATTANEAEALAVIRQTKDNF 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00332 329 Gene3D - 76 329 IPR036866 -
Spst5g00332 329 FunFam Hydroxyacylglutathione hydrolase, mitochondrial 76 329 - -
Spst5g00332 329 Pfam Hydroxyacylglutathione hydrolase C-terminus 245 329 IPR032282 -
Spst5g00332 329 Hamap Hydroxyacylglutathione hydrolase [gloB]. 76 329 IPR017782 GO:0004416|GO:0019243
Spst5g00332 329 SMART Lactamase_B_5a 86 244 IPR001279 -
Spst5g00332 329 SUPERFAMILY Metallo-hydrolase/oxidoreductase 76 328 IPR036866 -
Spst5g00332 329 Pfam Metallo-beta-lactamase superfamily 90 244 IPR001279 -
Spst5g00332 329 NCBIfam hydroxyacylglutathione hydrolase 79 329 IPR017782 GO:0004416|GO:0019243
Spst5g00332 329 CDD hydroxyacylglutathione_hydrolase_MBL-fold 81 244 IPR035680 -
Spst5g00332 329 PANTHER BETA LACTAMASE DOMAIN 70 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00332 Spst-Chr5 2767432 2770428 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00332 K01069 - gmx:100816314 592.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00332 5 2767432 2770428 Spst5g00332 5 2767432 2770428 ECH
Spst5g00332 5 2767432 2770428 Spst2g02436 2 24002218 24005510 PCT