Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02436 ATGAGTGACACTAAGGAAAGAAGTGGGTTTTGCGTCTGGCCGGATGCGAGACAACTTTGCTTGAGGAAAGGTCTTTTATATGGATTTATGCGATTATTTTCTATACCTTTAAAAACTTTGCGTGGAGCTAGTCGGTCGTTGAGAGTAGATCAATTTTGCAGTGTAGTGAATCTATCTTCCTCACTGCAGATTGAGTTGGTTCCATGCCTTCGGGACAATTATGCATATATTTTACATGATGTGGATACGGGGACAGTTGGTGTTGTTGATCCTTCCGAAGCTGCGCCTATTATAGATGCATTGAGTAAGAAAAATTTAAATTTGACATACATACTGAATACACACCACCATCATGATCACACTGGTGGAAATGCAGAGTTGAAAGAAAGGTACGGGGCAAAGGTAATTGGCTCAGAAATAGACAAGGAAAGAATTCCTGGTATTGATATTTATTTGAGTGATGGAGATAACTGGATGTTTGCGGGCCATGAGGTGCATATATTAGCTACACCTGGTCACACTGAAGGTCATGTAAGCTTCTACTTTCCAGGATCTGCGGCGATTTTTACAGGAGACACCTTGTTCAGCTTATCATGTGGCAAGCTCTTTGAAGGAACTCCTGAACAGATGCTATCATCTCTTAAAAGGATCATGTCTTTGCCAGATGAAACGAGTATTTACTCCGGTCATGAATATACATTGAGTAGTTCAAAGTTTGCCTTGTCCGTAGAACCTGAAAACAAGGAACTTCAATCCTATGCTGCTCATGTAGCTCACCTCAGAAATAAGGGCTTTCCCACGGTTCCAACTACGCTGAAGATGGAAAAAGCTTGCAATCCATTCCTTCGCACATGGAGCATGGAAATCCGGCAAAAGCTAAATATTGCACCCACAGCAGATGATGCAGAAGCCCTAGGAGTTATCCGACAAGCAAAGAATAAATTTTAG 948 0.4167 MSDTKERSGFCVWPDARQLCLRKGLLYGFMRLFSIPLKTLRGASRSLRVDQFCSVVNLSSSLQIELVPCLRDNYAYILHDVDTGTVGVVDPSEAAPIIDALSKKNLNLTYILNTHHHHDHTGGNAELKERYGAKVIGSEIDKERIPGIDIYLSDGDNWMFAGHEVHILATPGHTEGHVSFYFPGSAAIFTGDTLFSLSCGKLFEGTPEQMLSSLKRIMSLPDETSIYSGHEYTLSSSKFALSVEPENKELQSYAAHVAHLRNKGFPTVPTTLKMEKACNPFLRTWSMEIRQKLNIAPTADDAEALGVIRQAKNKF 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02436 315 SMART Lactamase_B_5a 72 230 IPR001279 -
Spst2g02436 315 Pfam Metallo-beta-lactamase superfamily 84 230 IPR001279 -
Spst2g02436 315 NCBIfam hydroxyacylglutathione hydrolase 65 315 IPR017782 GO:0004416|GO:0019243
Spst2g02436 315 Gene3D - 62 315 IPR036866 -
Spst2g02436 315 SUPERFAMILY Metallo-hydrolase/oxidoreductase 62 314 IPR036866 -
Spst2g02436 315 CDD hydroxyacylglutathione_hydrolase_MBL-fold 67 230 IPR035680 -
Spst2g02436 315 PIRSF Glx 57 315 IPR017782 GO:0004416|GO:0019243
Spst2g02436 315 PANTHER BETA LACTAMASE DOMAIN 56 315 - -
Spst2g02436 315 FunFam Hydroxyacylglutathione hydrolase, mitochondrial 62 315 - -
Spst2g02436 315 Pfam Hydroxyacylglutathione hydrolase C-terminus 231 315 IPR032282 -
Spst2g02436 315 Hamap Hydroxyacylglutathione hydrolase [gloB]. 62 315 IPR017782 GO:0004416|GO:0019243
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02436 Spst-Chr2 24002218 24005510 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02436 K01069 - gmx:100805615 578.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00332 5 2767432 2770428 Spst2g02436 2 24002218 24005510 PCT