Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00296 ATGGCATTTGAGGATCCAGAGTGCCCTCATGGCATTCGTCTTGTCATAGAGGACTACCCTTACGCTGTTGATGGACTTGAGATATGGGATGCTATAAAGAAATGGGTTCATGAATATGTTTTCTTGTACTACAAATCGGATGACACACTTAAAGAAGATCCTGAGCTGCAAGCTTGGTGGAAAGAACTGGTAGAGGTGGGTCATGGTGACAAGAAAAATGAGCCATGGTGGCCTAAGATGCAAACTCGTGAAGAGCTAGTTGAAGCTTGCACTATTGTCATATGGACTGCTTCAGCACTACATGCAGCTGTTAACTTTGGACAATATCCTTATGGAGGTTTAATCTTAAACCGTCCAACTCTTAGTAGGCGATTCATGCCAGAGAAGGGTTCTGCTGAGTATGAGGAGCTGAGAAAGAGCCCTCAGAAGGTTTTCTTGAAGACTATTACACCAAAGTTTCAGACCCTTGTTGACCTTTCTGTTATAGAAATCTTGTCAAGGCATGCTTCTGATGAGGTCTACCTAGGTAAGAGGGACAATCCAAATTGGACATCTGATACAAGGGCATTAGAGGCTTTCAAAAGGTTTGGAAACAAGCTGGCAGAAATTGAGAATAAACTCTCACAGAGAAACAATGATGAGAAACTGAGAAACCGCCATGGACCAGTTATGATGCCTTATACCCTGCTTTTCCCTTCTAGTGATGAAGGTTTAACTTTCAGAGGAATTCCCAACAGCATCTCTATCTGA 750 0.4267 MAFEDPECPHGIRLVIEDYPYAVDGLEIWDAIKKWVHEYVFLYYKSDDTLKEDPELQAWWKELVEVGHGDKKNEPWWPKMQTREELVEACTIVIWTASALHAAVNFGQYPYGGLILNRPTLSRRFMPEKGSAEYEELRKSPQKVFLKTITPKFQTLVDLSVIEILSRHASDEVYLGKRDNPNWTSDTRALEAFKRFGNKLAEIENKLSQRNNDEKLRNRHGPVMMPYTLLFPSSDEGLTFRGIPNSISI 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00296 249 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 1 249 IPR013819 GO:0016702|GO:0046872
Spst5g00296 249 Gene3D - 1 248 - -
Spst5g00296 249 PANTHER LIPOXYGENASE 1 249 IPR000907 GO:0016702|GO:0034440|GO:0046872
Spst5g00296 249 Pfam Lipoxygenase 1 232 IPR013819 GO:0016702|GO:0046872
Spst5g00296 249 SUPERFAMILY Lipoxigenase 1 249 IPR036226 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00296 Spst-Chr5 2579300 2580049 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00296 1 249 Acyl Lipid Metabolism Gene Families AT1G55020 66.265 3.55e-121 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00296 K15718 - gmx:547869 486.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00296 5 2579300 2580049 Spst4g02219 4 62920583 62924648 PCT
Spst4g02218 4 62908338 62913402 Spst5g00296 5 2579300 2580049 PCT