Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00286 ATGGGAATTTTTGCGGTAAACAAGGAAGGAGAGGTCTCAGTGAGCTTCAAGAACGACATAAATTTGAATGATTTTTATAAGCCTGATCAGATAGCTGATGCCACTACTGAACAATCTACAAACTTGAAGAGAAGGAAGGTGGGAAACCTGAAGCTCCAAACCGCATTCTCATTCAAAAATATGCTTTCGCAGAATTGTTGTTCACAAGAGGACTTGTTCAACAAACAAAAACCAAAACAAATGTTTTCTCCAACGTCCTCTGCCCAGCTTGAATTAGCAGCAATTAAGCTTCAGAAAGTTTACAAGAGTTACAGGATCAGAAGAAATCTGGCTGATTGTGCAGTTGTTTGCGAAGAGCTGTGGTGGAAGGACTCAGTGATTACTGCTAACAGGTGCTCTATATCCCATTTTGACTCTGATAAATCAGAAACAACTATTTCAAAATGGGCAAGAGCTAGGATGATGGCTGCTAAGGTGGGAAAAGGTTTGTCCAAAGATGATAAGGCACAGAAATTAGCACTAAGACACTGGCTTGAAGCTATTGATCCCCGTCATCGTTATGGTCACAATCTTCATTTCTACTATGAAGTCTGGTTTCGTAGCCAGAGCTATCAGCCTTTTTTCTACTGGTTGGACGTTGGAGATGGCAAAGAAGTGAATCTTGAAGCATGTCCTAGAAGGCAATTGCAAAGGCAGTGCATAAAGTACCTTGGACCCAAAGAAAGGGAAGCATATGAAGTGATTGTAGATGGAGGCAGGCTTGTTTATAGAGAGAGCAAGGACCTTGTACACACTACCGAGGAATCCAAGTGGATTTTTGTCCTTAGCTCATCTAGAATTTTGTACGTTGGACAGAAGAAGAAAGGCCAATTTCAGCACTCAAGTTTTTTAGCTGGTGGTGCTACCATTGCATCTGGAAGATTGGTTGCACAACATGGAGTTCTTCATGCTATATGGCCCTATAGTGGTCACTACCGTCCAACAGAAAAGAATTTCATGGAATTCATTAGCTTCTTGGAGGAACACAAAGTGGATATGACAAATGTAAAGAGAGATCCAATGGATGAAGATGTCCCCCCTTCTCAACCTGTCAATGAGGTGCTGCCATTTGACTACATAGATGGCAATGTGTGTGGCAATGACACTGCCACTGCCACTGCCAATAACTATGGTAAAGAAAATTTGAGCCACTTTGGTACCAATGTGGAAGGTTCAATTGAGGAGAACAAGCCCATGTCAAGCAAATGGACTACTGGAGTAGGTCCTCGGATTGGTTGTGTGAGAGAGTATCCAACAAAATTCCAAGTTCAAGCACTTGAACAACTCAATCTTTCACCTAGAGTGAACCAGGGAACATTTGCAGGCAAAGCACCTATTCCTTCTCCGAGACCCAGTACAAAACATCTGTCACCTAGGCTTGTGAACATGGGACTTCCTAGCCCAATGGTACATCTTTAG 1458 0.4239 MGIFAVNKEGEVSVSFKNDINLNDFYKPDQIADATTEQSTNLKRRKVGNLKLQTAFSFKNMLSQNCCSQEDLFNKQKPKQMFSPTSSAQLELAAIKLQKVYKSYRIRRNLADCAVVCEELWWKDSVITANRCSISHFDSDKSETTISKWARARMMAAKVGKGLSKDDKAQKLALRHWLEAIDPRHRYGHNLHFYYEVWFRSQSYQPFFYWLDVGDGKEVNLEACPRRQLQRQCIKYLGPKEREAYEVIVDGGRLVYRESKDLVHTTEESKWIFVLSSSRILYVGQKKKGQFQHSSFLAGGATIASGRLVAQHGVLHAIWPYSGHYRPTEKNFMEFISFLEEHKVDMTNVKRDPMDEDVPPSQPVNEVLPFDYIDGNVCGNDTATATANNYGKENLSHFGTNVEGSIEENKPMSSKWTTGVGPRIGCVREYPTKFQVQALEQLNLSPRVNQGTFAGKAPIPSPRPSTKHLSPRLVNMGLPSPMVHL 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00286 485 PANTHER IQ DOMAIN-CONTAINING PROTEIN IQM3 41 467 IPR044159 -
Spst5g00286 485 MobiDBLite consensus disorder prediction 453 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00286 Spst-Chr5 2512218 2514797 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00286 - - gmx:100780310 790.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00286 5 2512218 2514797 Spst5g00286 5 2512218 2514797 ECH
Spst4g02231 4 63033534 63036640 Spst5g00286 5 2512218 2514797 PCT