Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02231 ATGTTTAATCTTATGACTTTAGGAGAATGGCATGTTCATGAATTTGATGCATTAAATGGGTCACTACTGAAAAAGGAAAGGTCTTCTCCTCAAATTGTCACCAATGCTTGTGAAACTCTAACCTACCCAGTGCTACTTATTTGTCAGCTTCAGGGTGTGCAAATGGTGACAACGGTAAGGCCGGTGGACTATGAGTCAAAGGAGGGAGAGATCACCTTCAGAACAATGAGCTTCAACAAGTGCAGAAAACTTGACGAGTTGTATAATCCTGATGAATTGGATAAGGTTATTACTGAGAAATCTACAAGCCCAAAGAGAAAGAAGGTGGGGAATCTGAAGCTGCAAACAACATTCTCCTTCAAATATCTACTCTCTGATAATTCTGATTCAAAGGAGAAAGTTGATGGCTTGCTCAATAAACAAAGCCCCCCAATTGTGTTGCCAAAACAAGAAATGTTGTTTTCGCCAAAGTACATTGGGGAGCATGATGTGGCTGCAATCAAGCTGCAGAAGGTTTACAAGGGCTACAGGACTAGAAGAAATCTTGCAGATTGTGCAGTTGTTTGTGAGGAGCTATGGTGGAAAGCTTTAGACTTTGCTGCTCTAAGCAGGTGTTCCACATTAAATTTTGACTCTGCTAAATCAGAAACAGCAAGTTCAAAATGGGCAAGAGCTAGGACCATGGCTGCTAAGGTGGGAAAAGGTTTGTGCAAAGATGATAAGGCGCAGAAATTAGCTCTAAGGCACTGGCTTGAAGCTATTGATCCACGTCACCGTTATGGTCACAATCTGCACTTATACTATGATGTTTGGTTTCAAAGCCAGAGTTCACAACCTTTTTTCTACTGGTTGGACGTTGGAGATGGGAAAGAAGTAAATCTTGAGGAGTGCTTAAGAAGTGAATTGTATAAGCAATGCATAAAGTATCTTGGACCCAAAGAGAGGGAAGCATATGAAGTGGTTATTGAGGGAGGAAGGCTAGTTTATAGAAAGAGCCAGAACCTTGTACACACTGTGGAGGGATCAAAGTGGATTTTTGTTCTTAGCTCTTCTAGAGTTTTGTACGTTGGTGAGAAAAAGAAAGGTCAATTTCAGCACTCAAGTTTTTTGGCTGGGGGTGCCACTGTTGCATCTGGAAGATTGGTTGCTCAAGATGGAGTTCTTGATGCCATATGGCCCTACAGCGGTCATTACTGTCCTACAATGAAGAACTTTATGGAATTCATTGGGTTCTTGATGGAACATAACGTGGACTTGACCAATGTAAAGAAGTATGCAATTGATGATGACATCCCACCTTCAAAACCTGTTGATGAGGAGCTACAGATTGAATCCAAAATGGCTAACAATGCTAGTTCAAGTGGCTTTACCATTGCCAAAAACTCCAATGAAGACAATCTAGCTCAATCTGATACCAGTATGCAAAGTTCAAAAGTTAAAGAGAGGGAACCATTGTCAAGAAAATGGACAACTGGAGCTGGTCCTAGAATTGGTTGTGTGAGAGAGTACCCTGCAAAACTCCAAGTTAAGGCACTTGAACAACTCAATCTATCACCTAGACTCAACCATGGAAAAGTAGCAGCCAAGGCACCCATTCCCTCACCAAGGCCTAGTCCGAAAATCCACCTATCTCCCAGTCTTGTGCACATGGGAATGCCTAACCCCTGA 1668 0.4203 MFNLMTLGEWHVHEFDALNGSLLKKERSSPQIVTNACETLTYPVLLICQLQGVQMVTTVRPVDYESKEGEITFRTMSFNKCRKLDELYNPDELDKVITEKSTSPKRKKVGNLKLQTTFSFKYLLSDNSDSKEKVDGLLNKQSPPIVLPKQEMLFSPKYIGEHDVAAIKLQKVYKGYRTRRNLADCAVVCEELWWKALDFAALSRCSTLNFDSAKSETASSKWARARTMAAKVGKGLCKDDKAQKLALRHWLEAIDPRHRYGHNLHLYYDVWFQSQSSQPFFYWLDVGDGKEVNLEECLRSELYKQCIKYLGPKEREAYEVVIEGGRLVYRKSQNLVHTVEGSKWIFVLSSSRVLYVGEKKKGQFQHSSFLAGGATVASGRLVAQDGVLDAIWPYSGHYCPTMKNFMEFIGFLMEHNVDLTNVKKYAIDDDIPPSKPVDEELQIESKMANNASSSGFTIAKNSNEDNLAQSDTSMQSSKVKEREPLSRKWTTGAGPRIGCVREYPAKLQVKALEQLNLSPRLNHGKVAAKAPIPSPRPSPKIHLSPSLVHMGMPNP 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02231 555 MobiDBLite consensus disorder prediction 454 475 - -
Spst4g02231 555 MobiDBLite consensus disorder prediction 527 555 - -
Spst4g02231 555 PANTHER IQ DOMAIN-CONTAINING PROTEIN IQM3 103 541 IPR044159 -
Spst4g02231 555 MobiDBLite consensus disorder prediction 454 490 - -
Spst4g02231 555 ProSiteProfiles IQ motif profile. 162 191 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02231 Spst-Chr4 63033534 63036640 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02231 - - pvu:PHAVU_010G137300g 900.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02231 4 63033534 63036640 Spst5g00286 5 2512218 2514797 PCT