Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00269 ATGACAGACAGGGTGTACCCTTCGGCCAAGCCAGCTACCAACGGCGCCGCCGCGAACCCGGCTTTCCCGGCGACGAAAGCCCAACTATACGGCGCCACTCGCCCAACCTACCGCCCGCAGCCTCACCACCGGCGCCGGAGCAAGCGTGGTTGCTGCTGCACCTTCTGCTTCTGGCTTATCCTCACCGTGCTCGTCCTCCTCCTCCTGATCGGCGTCGCTGGTACCGTGTTTTACCTTCTCTACCGCCCCCACCGCCCCAGCTTCACCGTGACGTCGCTGAAACTTTCGTACCTGAACCTCACCTCCTCCTCTACCCTGAACTCCCGCTTCGACGTCACCGTTTCCGCCACCAACCCCAACAAGAAGATCCTCTTCGCCTACGACCCCACCTCCATCTCCATCCTCTCCAGCGACGTCGACGTCGGCGACGGCACCGTCCCCGCCTTCGTGCACGGCAAGAAGAACACCACGCTCATCAAAACCTCCATCGTGAGCACCGGCCACGCGCTCCAGAGCGACGAAGCCTCACGCTTGAAGTCCAGCATGAAGAGCAAGAACGGGTTACCACTGACGGTGAACTTGGAAACGAAAGTGAAGGCCAAAATGGGAAAATTGAAAAGCCCGAAGGTCGGAATCAGAGTCTCCTGCGACGGAATCAGAGTGACTCTCCCCTCCGGCAAGAAACCGGCGACGGCGTCCACTTCGAACGCCAAGTGCAACGTCGATGTTAAATTCAAGATCTGGAAGTGGACAGTTTGA 759 0.5942 MTDRVYPSAKPATNGAAANPAFPATKAQLYGATRPTYRPQPHHRRRSKRGCCCTFCFWLILTVLVLLLLIGVAGTVFYLLYRPHRPSFTVTSLKLSYLNLTSSSTLNSRFDVTVSATNPNKKILFAYDPTSISILSSDVDVGDGTVPAFVHGKKNTTLIKTSIVSTGHALQSDEASRLKSSMKSKNGLPLTVNLETKVKAKMGKLKSPKVGIRVSCDGIRVTLPSGKKPATASTSNAKCNVDVKFKIWKWTV 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00269 252 Pfam Late embryogenesis abundant protein 113 216 IPR004864 -
Spst5g00269 252 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 12 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00269 Spst-Chr5 2354499 2355257 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00269 26 238 EF-hand Containing Proteins AT5G21130 26.389 3.88e-19 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00269 - - gmx:100819194 414.075
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00269 5 2354499 2355257 Spst4g02246 4 63255337 63256095 PCT