Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02246 ATGACTGATAGGGTCCATCCTTCTGCAAAAACCACCGCCATCGGCGGCCCCAAGCCAACATTCCCAGCCACAAAATCCCAACTTTCTGGCGCCAACCGCCCCACTTACCGCCCCCAACCACCCCACCGCCGTCACCACAGCCGCGGTTGCGTCTCCACCCTTTGCTGCTACCTCTTCCTGATCCTCCTCTTCGTCCTCCTCCTCATCGCTGGCGCCGGCACCGTACTCTACTTCCTCTACCACCCCCAACGCCCTTCATTCTCCGTCAACTCCCTCAAACTCTCCTACTTCCACCTCACCTCTCCCTCCACCTTCAACGCCAAGTTCGACCTCACTCTCTCAACCACCAACCCCAACGACAAGATCCTATTCTCATACGACCCCACCTCCGTCTCCCTCCTCTACGGCGACGCCACGCTCGCCACTGCCACCATCCCCTCCTTCCTCCACCGCCAGAGGAACACCACCGTAATCGAGGCCTACGTCACGAGCACCGAGGAAGAGGTGCAGAGCGACACCGTCATGGAGCTGAAGAGGAGCACGAAGAGCAAGAGCGAGGTGGCGCTCAAGGTGAAGTTGGAGACCAAGGTAGACGCCCAGATGGGTGTGTTCCAAACGCCACACGTCGGAATCACCGTTTTGTGCGACGGAGTCGCCGTGTCTCTCCCCGACGGCGAGAAACCGGCGTCAGCGTCTGTTGAGAATACGGCGTGCAGAGTGGATGTAAGGTTCAAGGTCTGGAAATGGACTGTAGGATGA 759 0.5916 MTDRVHPSAKTTAIGGPKPTFPATKSQLSGANRPTYRPQPPHRRHHSRGCVSTLCCYLFLILLFVLLLIAGAGTVLYFLYHPQRPSFSVNSLKLSYFHLTSPSTFNAKFDLTLSTTNPNDKILFSYDPTSVSLLYGDATLATATIPSFLHRQRNTTVIEAYVTSTEEEVQSDTVMELKRSTKSKSEVALKVKLETKVDAQMGVFQTPHVGITVLCDGVAVSLPDGEKPASASVENTACRVDVRFKVWKWTVG 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02246 252 MobiDBLite consensus disorder prediction 1 45 - -
Spst4g02246 252 SUPERFAMILY LEA14-like 64 207 - -
Spst4g02246 252 Pfam Late embryogenesis abundant protein 112 213 IPR004864 -
Spst4g02246 252 Gene3D - 78 211 - -
Spst4g02246 252 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 15 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02246 Spst-Chr4 63255337 63256095 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02246 36 239 EF-hand Containing Proteins AT5G21130 26.636 2.61e-15 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02246 - - gmx:102669753 382.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02246 4 63255337 63256095 Spst4g02246 4 63255337 63256095 ECH
Spst5g00269 5 2354499 2355257 Spst4g02246 4 63255337 63256095 PCT