Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00265 ATGGCTTCCATTGGTGCACTCAAATTCTTCCTTTACTCACTTCTATGCCTCCTCAACTATCTACCACTTTCTCAAGGTAAGAAGAACTGGAATGATGGGTACCCATTTATCAGGAGAGCAAGTTCATTGGGGTCTTCATCCAGTGGGGACTATGACTATATAATAGTGGGAGGTGGCACTGCAGGATGTCCATTGGCTGCAACCCTGTCTCAGAAGTTCAAAGTTCTGGTGCTGGAAAGAGGAGGAGTTCCTTTCAACAACCCAAATGTGTCATTCCTACAAAACTTTCACATTACTCTGGCAGACACTTCACCAACTTCAGCTTCTCAGTACTTCATTTCAACAGACGGAGTGCTGAATGCAAGGGGAAGGGTTTTGGGAGGTGGCAGTTCCATTAACGCTGGCTTCTACACTAGAGCTAATCCAAGATTTATAAGGAAGGTGGGGTGGGATGCAAAGCTAGTGAACGAGTCTTATCCTTGGGTGGAGAAGCAGGTTGTTCATCGCCCAAAATTTTCAGATTGGCAGAGAGCGGTTAGAGACGGGCTTCTAGATGCTGGTGTGTCTCCTTTTAATGGGTTCACTTACGATCACAAGTATGGCACCAAAGTTGGTGGAACCATTTTTGACAGATTTGGCCGTCGCCACACTGCTGCTGAATTGCTTGCTTCCGGGAACCCTCGCAAACTTACTGTCTTCATCCATGCCACTGTCCAGAAGATTGTTTTCGATACAACAGGAAAGAGACCAAAAGCTATTGGGGTTATTTTCAAGGATGAAAATGGAAAGCAGCATCAGGCATTTCTGGGAACTGGCAGGCAGAGTGAGGTGATTGTGTCTAGTGGGGCAATTGGGACTCCTCAATTGCTACTGCTCAGTGGTATAGGCCCCACAGAAGAGCTTCAGAAATTCAACATTCCTGTGGTGCTTGACAATGAATTCGTTGGTAAAGGCATGGCTGATAATCCCATGAACACAATTTTTGTTCCTTCCAAGAGACCAGTGCAGCAGTCACTCATAGAAACTGTTGGTATAACCAATTTGGGTGTGTACATTGAAACTAGTTGTGGCTTTGGGCAGTCCAAAGACAGCATTCGGTGCCACCATGGTCTCTTGTCAGCTGAGATTGGACAGTTGTCCACAATTCCACCAAAACAAAGATCACGAGAAGCTGTTGAAGCTTTTGTGAAGAGCAAGAAAGACATACCAATTGAAGCATTCAGGGGAGGGTTCATATTGTCAAAAGTTGCCAATCCTTGGTCAACTGGTGAGCTCAAGTTGATAAACACCAACGTGGAGGACAACCCTGCTGTTACCTTCAACTACTTCAGTCACCCTTATGATCTTAAACGCTGTGTGGAGGGTATCCGCTTGGCCATAAAGGTTGTCCAGTCACAGCATGTCACAAACTACACTATGTGTGATAGAGAAACCGCAGAGAAAATGCTGAACCTCACTGTGAAGGCTAATATCAATCTCATACCCAAACATGCTAATGACACAAAGTCACTAGAACAGTTTTGTAGAGACACGGTGATCACTATTTGGCACTACCATGGTGGGTGCCATGTGGGCAAAGTAGTAAACTCTGAGTATAAGGTTCTTGGTGTTGACAGACTCCGTGTGGTAGATGGCTCAACATTCACTGAGTCGCCAGGAACCAATCCTCAAGCCACTGTGATGATGATGGGCAGGTACATGGGACTGAAGATTCTAAGGGACAGATTGGGGAAATTGGCTGGAGTTGATAGTTCTATAACTGTTAGCTTCATTACAACAGTGCAGCGACTATGGAAAAGAATATCTAAAACTGTTAAGAGAAAGTTGATATCAGGGTTCAACTTCCCATTTTACTGA 1857 0.4496 MASIGALKFFLYSLLCLLNYLPLSQGKKNWNDGYPFIRRASSLGSSSSGDYDYIIVGGGTAGCPLAATLSQKFKVLVLERGGVPFNNPNVSFLQNFHITLADTSPTSASQYFISTDGVLNARGRVLGGGSSINAGFYTRANPRFIRKVGWDAKLVNESYPWVEKQVVHRPKFSDWQRAVRDGLLDAGVSPFNGFTYDHKYGTKVGGTIFDRFGRRHTAAELLASGNPRKLTVFIHATVQKIVFDTTGKRPKAIGVIFKDENGKQHQAFLGTGRQSEVIVSSGAIGTPQLLLLSGIGPTEELQKFNIPVVLDNEFVGKGMADNPMNTIFVPSKRPVQQSLIETVGITNLGVYIETSCGFGQSKDSIRCHHGLLSAEIGQLSTIPPKQRSREAVEAFVKSKKDIPIEAFRGGFILSKVANPWSTGELKLINTNVEDNPAVTFNYFSHPYDLKRCVEGIRLAIKVVQSQHVTNYTMCDRETAEKMLNLTVKANINLIPKHANDTKSLEQFCRDTVITIWHYHGGCHVGKVVNSEYKVLGVDRLRVVDGSTFTESPGTNPQATVMMMGRYMGLKILRDRLGKLAGVDSSITVSFITTVQRLWKRISKTVKRKLISGFNFPFY 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00265 618 Pfam GMC oxidoreductase 419 565 IPR007867 GO:0016614
Spst5g00265 618 SUPERFAMILY FAD-linked reductases, C-terminal domain 319 521 - -
Spst5g00265 618 Gene3D - 168 514 - -
Spst5g00265 618 Pfam GMC oxidoreductase 51 323 IPR000172 GO:0016614|GO:0050660
Spst5g00265 618 PIRSF Alcohol_oxidase 37 583 IPR012132 GO:0050660
Spst5g00265 618 Gene3D - 51 564 IPR036188 -
Spst5g00265 618 PANTHER OSJNBA0019K04.7 PROTEIN 20 576 - -
Spst5g00265 618 SUPERFAMILY FAD/NAD(P)-binding domain 48 575 IPR036188 -
Spst5g00265 618 ProSitePatterns GMC oxidoreductases signature 2. 282 296 IPR000172 GO:0016614|GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00265 Spst-Chr5 2331435 2336878 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00265 4 575 Miscellaneous Gene Families AT5G51950 49.913 0.0 554
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00265 K15403 - gmx:100784433 1056.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00265 5 2331435 2336878 Spst5g00265 5 2331435 2336878 ECH
Spst5g00265 5 2331435 2336878 Spst4g02248 4 63268014 63274418 PCT