Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00263 ATGGCCGATTCTCAGCATGTGGCTGATGTGGCGCACTGTGTTGCCAACTTGAGGAAACGATTCCATCATTCTATCGCTCCAGGTGGCCTTGCAGGGGATCGGCGTGGCGTAGTTCCTGCTTCTGGCTTTTCTTTTAGTGCTCAGGAAATCTGGAAAATCATTAAGGAGAATAAGGATCTCGACCTTCCCGCACACAAGGTCATGGTTGCTACTGTACGATGTGAAGAAATTGCTAATGAAAAATATGACCTTTTTGCTTCAAATAAGGACTGGTGTGAGTTGAAAGAGGCCGTTGAATCTGGTCCTGTTCCTGGTTTTGGGAAAAATGCCAATTCACTCCTATCCAATAGCCTTTCAGAATATGATGCTGAAGCCAATTATTTTGACGAAGGTGTTAGATCGGCAAAACAAAAGCAACTTCAAGAAAAATTGTTGCAACTTGTCCAACCAGCATTCCAAATTGCGCTGGGACATGTAAGGTCCGGAGTTTTGGAAAAGTTCAAGGAAGCATTTGACAAGGCTTTGAATAGAGGGGAAGGGTTTTCTTCTGCTGCTAATTCGTGCGTAGAGTCTTATATGGCTCGGTTTGATGAAGGATGTGCAGATGTTGTCATTGAAATAGCAGACTGGGATACATCTAAAGTGAGGGAGAAGCTACGGCGTGATATTGATGCACATGTCTCATCTGTTCGTGCATCTAAGATATCAGAACTAGTTTCATCATATGAGGAAAAACTGAAGGAGGCATTGTCTGCACCTGTTGAAACTCTATTGGATGGAGCTAATAAAGATACTTGGCCATCGATAAGGAAACTTCTTAATCGTGAGACTCAATCAGCTGTTTCTGGGTTCTCTGCTGAACTTGACAGATTTGATATGGACGAAGAAACAAAAAAGAGCATGATTGTGACTTTAGAGGATTATGCAAAGGGTATGATAGAAGCCAAGGCAAGGGAAGAAGCTAGCAGAGTTCTAATCCGTATGAAGGACAGTCATGATTCTGATTCAATGCCTCGTGTTTGGACGGGAAAAGAAGATATTCGAGCCATCACAAAGTCTTCCCGCTCTGCATGCTTGAAGTTGCTGTCTGTAATGGCTGTAATTCGTTTGGCTGATGCTGATGACATTTATGACATAGAGAAAACATTAAAAGTTGCATTGGAAGATTCATCAAGCGGGTCTGGTAAAGATAAGAGCATCACGACACTTGATCCACTGGCTTCAAGCACTTGGGAGCAGGTGCGAATGGTGAGAAGAGAACTTGTGGAGCCTGAGTGTATGGAAATAACAGAAAGCGAAACAAAAATGAAGGCATGCTGGTATAAACTGGATCAGAAGTTGAGCCGTAATCAAAAGGAAGCCAACAATCGTAGCAACAACTGGTTACCTCCACCATGGGCGATCATTGCTTTGCTTATTCTTGGATTTAATGAATTTATGACACTTCTAAGAAATCCCTTGTATGTATGTTTCATCTTTGTTGGCTATCTTCTCGTAAAAGCCCTATGGGTGCAGCTTGACATTGCGGGTGAATTTCGAAATGGAGCTCTTCCTGGACTTATCTCCCTGTCTACCAAGTTTATTCCAATTATCATGAACCTTATGAGAAAACTAGCAGAGGAGGGACAAAGCGCTGCAGCTGATAATCATAATAGAAACCCATCAAAAAGCTATAACAGGCCTGTTCCTTCTGGTAGAGTTACCTCATCTAGTTCTTCTTCTAATGTAACGTCATTGGGCAAAAGAACCAACTCAACCGAGTTTACCAGTTCATCAAAAGACGAGTAG 1788 0.4245 MADSQHVADVAHCVANLRKRFHHSIAPGGLAGDRRGVVPASGFSFSAQEIWKIIKENKDLDLPAHKVMVATVRCEEIANEKYDLFASNKDWCELKEAVESGPVPGFGKNANSLLSNSLSEYDAEANYFDEGVRSAKQKQLQEKLLQLVQPAFQIALGHVRSGVLEKFKEAFDKALNRGEGFSSAANSCVESYMARFDEGCADVVIEIADWDTSKVREKLRRDIDAHVSSVRASKISELVSSYEEKLKEALSAPVETLLDGANKDTWPSIRKLLNRETQSAVSGFSAELDRFDMDEETKKSMIVTLEDYAKGMIEAKAREEASRVLIRMKDSHDSDSMPRVWTGKEDIRAITKSSRSACLKLLSVMAVIRLADADDIYDIEKTLKVALEDSSSGSGKDKSITTLDPLASSTWEQVRMVRRELVEPECMEITESETKMKACWYKLDQKLSRNQKEANNRSNNWLPPPWAIIALLILGFNEFMTLLRNPLYVCFIFVGYLLVKALWVQLDIAGEFRNGALPGLISLSTKFIPIIMNLMRKLAEEGQSAAADNHNRNPSKSYNRPVPSGRVTSSSSSSNVTSLGKRTNSTEFTSSSKDE 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00263 595 MobiDBLite consensus disorder prediction 546 587 - -
Spst5g00263 595 MobiDBLite consensus disorder prediction 543 595 - -
Spst5g00263 595 Pfam Sey1 three-helix bundle domain 105 541 IPR046758 -
Spst5g00263 595 PANTHER PROTEIN SEY1 13 564 IPR008803 -
Spst5g00263 595 Pfam Root hair defective 3 GTP-binding protein (RHD3) GTPase domain 12 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00263 Spst-Chr5 2315284 2322430 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00263 K22698 - gmx:100797516 849.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00263 5 2315284 2322430 Spst4g02250 4 63280112 63288411 PCT