Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00250 ATGACCAGCTACGGCACAATCCCAACCTCTTCTTCACCTTCCACAAACCTCGACTTCATCTCACGCGCCAAGCACCGTGTCAAGGAGGGTCTCGCCACGCGCCGTCCATGGAAGCTCATGTTCAACCTCGGTTCCTTCGGCCTCCCCGCCGGTTTCTCCGACGCCGTGGGGCGCGTGCGGGAGAACGTCAGCTTCTTCCAGATGAATTACGCCATCGTCGTGCTCATCGTCCTCTTCCTCAGTCTCCTCTGGCACCCAATCTCGCTGATCGTCTTCGTCGTGCTGATGGCGGCGTGGCTCTTCCTCTACTTCCTCCGCGACGAGCCGCTCTTCATCTTTGGCCGGATGATTAGCGACCGCGTCGTGCTCGTCGTCATGGCGGTGCTGACCATCGCGCTCCTCCTCCTCACCGGCGCCATCCCCAACATCCTGGTGGCGCTCCTCATCGGAGCCGTCTTGGTGGTGGCGCACGCCGCCTTCAGAAGAACCGATGATTTGTTCTACGATGAAGAAGAGGCCACTGCTCGCTTCGTTCCTCCTCCTCCTCCTCCTCATTCCGGTGCCCCTCTTTCTTGA 576 0.6024 MTSYGTIPTSSSPSTNLDFISRAKHRVKEGLATRRPWKLMFNLGSFGLPAGFSDAVGRVRENVSFFQMNYAIVVLIVLFLSLLWHPISLIVFVVLMAAWLFLYFLRDEPLFIFGRMISDRVVLVVMAVLTIALLLLTGAIPNILVALLIGAVLVVAHAAFRRTDDLFYDEEEATARFVPPPPPPHSGAPLS 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00250 191 PANTHER PRENYLATED RAB ACCEPTOR 1-RELATED 1 172 IPR004895 -
Spst5g00250 191 Pfam PRA1 family protein 31 171 IPR004895 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00250 Spst-Chr5 2258930 2259505 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00250 K20359 - gmx:100788152 274.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00250 5 2258930 2259505 Spst5g00250 5 2258930 2259505 ECH
Spst5g00250 5 2258930 2259505 Spst4g02258 4 63377585 63378133 PCT