Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02258 ATGACAACAACCTACGGCACGATCCCAACCTCGGGGCCTCCGAACCTGGAATACATATCGCGCGCCAAGCAGCGGATCAAGGCGGGGTTGGGGACGCGGCGGCCGTGGAAGGCCATGCTGAATTTCCGGTCGCTCAAGGTCCCCGGCCGCGGCGCGGCGGAGGCGCTGTCGCGCGTGGCGGTGAACGTGTCGTACTTCCGCATGAACTACGCAATGGTGGCCCTGCTGATTCTCTTCCTGAGCCTCCTCTGGCACCCCATCTCGCTCATTGTCTTCCTTCTCCTCATGGCGGCATGGCTCTTCCTCTACTTCCTCCGCGACGAGCCCCTTATCCTTCTCGGCCACCTCGTTGATGACCGCCTCGTGCTCGTCGCCATGGCCGTCCTCACAGTAGCACTGCTGCTGCTCACCGACGCCACCGTCAACATCCTCGTGGCGGTGGCCGTCGCCGTGGTGGTGGTGGTGGCCCACGCCGCGTTCCGGAGGACGGAGGATCTGTTCTTGGGGGAAGAGGAAGAAGCTGCCGCCGCCTTGGCTGGTGCTGCTTGA 549 0.643 MTTTYGTIPTSGPPNLEYISRAKQRIKAGLGTRRPWKAMLNFRSLKVPGRGAAEALSRVAVNVSYFRMNYAMVALLILFLSLLWHPISLIVFLLLMAAWLFLYFLRDEPLILLGHLVDDRLVLVAMAVLTVALLLLTDATVNILVAVAVAVVVVVAHAAFRRTEDLFLGEEEEAAAALAGAA 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02258 182 Pfam PRA1 family protein 30 170 IPR004895 -
Spst4g02258 182 PANTHER PRENYLATED RAB ACCEPTOR 1-RELATED 1 172 IPR004895 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02258 Spst-Chr4 63377585 63378133 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02258 K20359 - gmx:100789765 266.929
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02258 4 63377585 63378133 Spst4g02258 4 63377585 63378133 ECH
Spst5g00250 5 2258930 2259505 Spst4g02258 4 63377585 63378133 PCT