Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00229 ATGAGTATGATCTCATCACACATGCTCTCAGACAAAGAGTTTATCTCTGGAGACTCAGTTGCTTCTAAGACAGAATCTGACAACACCATGCTGGATTCTACCACTCCCCATGACAAAATTACCACACCAGCTCCTGGCTTTCTACTTGAAGATGTTCCTCATCTGTCTGATTACATCTCTCACCTTCCTACATATCCTGACCCGTTACAAGACAATCCTTCGTATTCAGTTGTTGCTGTTTCAGAATTGGTTTCATTTGTGCAGATAATTGTACACAAAGATAGTCCAAGAGGGACCCATTTTCGGCGTGCTGGGCCAGCTCAAAAGGTATATTTTGATTCAGAGGAAGTGTCCGCTTGTATTGTAACTTGCGGTGGACTTTGTCCTGGTCTAAATACAGTTATAAGAGAAATAGTATGCGGCTTATATCATATGTATGGGGTGCACAAAGTTCTGGGAATAGAGGGAGGATATCCAGGATTTTATTCTAGAAATACAGTTACTTTAACACCAAAGGTTGTGAATGATATCCACAAACGTGGTGGAACCATCCTTGGGACATCATATGGTGGCCATGACACCTCAAAGATTGTTGACAGCATTCAGGACCGGGGCATTAATCAGGTTTATATACTTGGAGGATACGGAACTCAGTATGAAGCAGCTATGATTTTTGAGGAAGTTAGAAGGCGTGGCTTGAAAGTTTCAGTAGTTGGAATTCCAAAAACTATTGACAATGATATCCCAGTTATTGATAAGTCAATTGGTTTCGACACTGCTGTCGAAGAGGCACAACGGGCTATCAGTTCTGCTCATGTGGAAGCAGAAAGCGCAGAGAATGGTATTGGTGTTGTAAAATTAATGGGGCGTTACAGTGGATTTATAGCCATGTATGCAACTCTTGCAAGCCGAGATGTGGACTGTTGCCTGATTCCAGAGTCACCCTTTTATATGGAGGGTCCAGGAGGACTGTTGGAGTTCATCGAGAGAAGACTGAAAGAACAAGGCCACATGGTTATAGTAATTGCTGAAGGTGCAGGTCAGGAGTTTCTTTCTGGTAACCCATCCATTGTTAATAAGCAGGAGGCTTCCGCTGACAAATTATTTCCGGATGTTGGTCTGTGGTTATCCCAGAAAATCAAGGATCACTTTGCAAAACATAAAAAAATGGATATTAATCTGAAGTACATTGATCCTACTTACATGATCCGTGCTATCCCAAGTAATGCATCTGATAATGTATACTGCACGCTCCTTGCCCAAAGTGCAGTTCATGGTGCAATGGCAGGATACACTGGCTTCACCGTGGGTCCAGTTAATGGCAGAAATTGTTACATTCCATTTCATCTGATAAACGACGGAGAGAAGAGGGTTGTGATAACTGATAGGATGTGGGCAAGATTACTATCTTCAACCCATCAACCCAGCTTCTTGAATCCAAAAGACATCTCAGCAGAAAGAGAGCAAACAACAAAACACCAAACAGACGGACAGAACCATCCAGAAATAGCAGGCTAA 1518 0.4242 MSMISSHMLSDKEFISGDSVASKTESDNTMLDSTTPHDKITTPAPGFLLEDVPHLSDYISHLPTYPDPLQDNPSYSVVAVSELVSFVQIIVHKDSPRGTHFRRAGPAQKVYFDSEEVSACIVTCGGLCPGLNTVIREIVCGLYHMYGVHKVLGIEGGYPGFYSRNTVTLTPKVVNDIHKRGGTILGTSYGGHDTSKIVDSIQDRGINQVYILGGYGTQYEAAMIFEEVRRRGLKVSVVGIPKTIDNDIPVIDKSIGFDTAVEEAQRAISSAHVEAESAENGIGVVKLMGRYSGFIAMYATLASRDVDCCLIPESPFYMEGPGGLLEFIERRLKEQGHMVIVIAEGAGQEFLSGNPSIVNKQEASADKLFPDVGLWLSQKIKDHFAKHKKMDINLKYIDPTYMIRAIPSNASDNVYCTLLAQSAVHGAMAGYTGFTVGPVNGRNCYIPFHLINDGEKRVVITDRMWARLLSSTHQPSFLNPKDISAEREQTTKHQTDGQNHPEIAG 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00229 505 FunFam ATP-dependent 6-phosphofructokinase 113 303 - -
Spst5g00229 505 PIRSF ATP_PFK_TP0108 23 482 IPR012004 GO:0003872|GO:0005524|GO:0006096
Spst5g00229 505 Gene3D - 113 303 - -
Spst5g00229 505 MobiDBLite consensus disorder prediction 18 40 - -
Spst5g00229 505 Hamap ATP-dependent 6-phosphofructokinase [pfkA]. 52 478 IPR012004 GO:0003872|GO:0005524|GO:0006096
Spst5g00229 505 Coils Coil 261 281 - -
Spst5g00229 505 MobiDBLite consensus disorder prediction 18 43 - -
Spst5g00229 505 PANTHER ATP-DEPENDENT 6-PHOSPHOFRUCTOKINASE 1 19 484 - -
Spst5g00229 505 PRINTS ATP-dependent phosphofructokinase family signature 238 255 IPR022953 GO:0003872|GO:0006002|GO:0006096
Spst5g00229 505 PRINTS ATP-dependent phosphofructokinase family signature 334 346 IPR022953 GO:0003872|GO:0006002|GO:0006096
Spst5g00229 505 PRINTS ATP-dependent phosphofructokinase family signature 205 221 IPR022953 GO:0003872|GO:0006002|GO:0006096
Spst5g00229 505 PRINTS ATP-dependent phosphofructokinase family signature 121 140 IPR022953 GO:0003872|GO:0006002|GO:0006096
Spst5g00229 505 PRINTS ATP-dependent phosphofructokinase family signature 256 274 IPR022953 GO:0003872|GO:0006002|GO:0006096
Spst5g00229 505 PRINTS ATP-dependent phosphofructokinase family signature 277 293 IPR022953 GO:0003872|GO:0006002|GO:0006096
Spst5g00229 505 MobiDBLite consensus disorder prediction 477 505 - -
Spst5g00229 505 SUPERFAMILY Phosphofructokinase 96 479 IPR035966 GO:0003872|GO:0006096
Spst5g00229 505 Pfam Phosphofructokinase 120 425 IPR000023 GO:0003872|GO:0006096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00229 Spst-Chr5 1988418 1992165 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00229 K00850 - gmx:100815278 875.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00229 5 1988418 1992165 Spst4g02301 4 63725462 63733744 PCT