Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02301 ATGTCCAATTCTGAACACAAGATCATCACTGGACATGCCGGCTATGTCCTTGAAGATGTCCCTCATCTATCTGACTACATCCCCGACCTCACTACATATCCTAATCCGTTGCAAGACAATCCTTCCTATTCAGTTGTTAAGTACGTTGCTTGCTATGTATTAAACTTGAAGTTTGAATTGATTCTTCCTGGTGTTGGCAACATTCTGTTGATGTGGAAGATACTGTTGCGCAAAAGGCAAGCTGTTGTTGTTATAGTTGTACATAAGGATAGCTCAAGAGGGACTCATTTTCGCCGAGCCGGGCCTCGTCAAAAGGTATATTTTGAGTCCGAGGATGTGTACGCTTGTATTGTCACATGTGGAGGTCTTTGTCCCGGTGTAAATACATTGATCAGGGAAGTAGTTTGCGGGTTACACCATATGTATGGGGTGCATAAAGTACTGGGAATAGAGGGAGGGTATAGAGGTTTTTATTCTCGAAATACAATTCCATTGACACCAAAGGATGTGAATGACATCCACAAACGTGGTGGAACCATCCTCGGTACCTCACAGGGAGAAGGAAGTAATGATACTTCAAAGATTGTTGATAACATTCAGGATCGGGGAATTAATCAGGTTTACATACTTGGAGGAGATGGAACCCAGAGAGGGGCTTCTGTGATTTTTGAGGAAATTAGAAGACGTGGCTTGAAAGTTTCAGTGGTGGGAATTCCGGAATCTGTTGATAATGATATCCCAGTTATTGATAAGTCATTTGGTTTTGACACTGCTGTTGAAGAGGCACAACGGGCCATAAATGCTGCTCACGTGGAAGCAGAAAGCACAGAGAATGGTATTGGTGTTGTCAAGCTAATGGGTCGTCAGAGTGGATTCATAGCCATGTATGCAACTCTTGCCAGCCGAGATGTAGATTGTTGCTTAATTCCAGAGTCACCCTTTTACCTTAAGGGTCCAGGTGGACTCTTTGAGTTCATTAGGAAAAGACTCACAGAAAATGGGCACATGGTTATAGTAATAGCCGAAGGTGCAGGTCAAGAAAATATGCAGGATGTTTTGGGCAACAAGTTACTTCAAGATGTTGGTTTGTGGTTATCCCAGAAGATTAAGGACCACTTCGCAGAAAGTCAAAAAATGGCTATAACTCTGAAATACATTGATCCCACGTACATGATTCGTGCTGTTCCAAGTATTGCATCTGATAATGTATCGTGCACTCTCCTCGCTCAAAGTGCGGTTCATGGTGCAATGGCTGGATACACAGGCTTCGCAGTTGGTACCGTCAATGGCAAGCATGCTTATATTCCATTTTATCGGATAAATGAGAATGAGAAGAAGGTTGTCATAACTGACCGCATGTGGGCAAGGTTACTGTCTTCAACCAATCAACCAAGCTTCTTGAATCCTAAAGAAATTACCACTACTGCACAAATGGAACACCACACATCAAACGACAAACCATTGTCACATCATTAA 1476 0.4268 MSNSEHKIITGHAGYVLEDVPHLSDYIPDLTTYPNPLQDNPSYSVVKYVACYVLNLKFELILPGVGNILLMWKILLRKRQAVVVIVVHKDSSRGTHFRRAGPRQKVYFESEDVYACIVTCGGLCPGVNTLIREVVCGLHHMYGVHKVLGIEGGYRGFYSRNTIPLTPKDVNDIHKRGGTILGTSQGEGSNDTSKIVDNIQDRGINQVYILGGDGTQRGASVIFEEIRRRGLKVSVVGIPESVDNDIPVIDKSFGFDTAVEEAQRAINAAHVEAESTENGIGVVKLMGRQSGFIAMYATLASRDVDCCLIPESPFYLKGPGGLFEFIRKRLTENGHMVIVIAEGAGQENMQDVLGNKLLQDVGLWLSQKIKDHFAESQKMAITLKYIDPTYMIRAVPSIASDNVSCTLLAQSAVHGAMAGYTGFAVGTVNGKHAYIPFYRINENEKKVVITDRMWARLLSSTNQPSFLNPKEITTTAQMEHHTSNDKPLSHH 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02301 491 PRINTS ATP-dependent phosphofructokinase family signature 236 253 IPR022953 GO:0003872|GO:0006002|GO:0006096
Spst4g02301 491 PRINTS ATP-dependent phosphofructokinase family signature 254 272 IPR022953 GO:0003872|GO:0006002|GO:0006096
Spst4g02301 491 PRINTS ATP-dependent phosphofructokinase family signature 203 219 IPR022953 GO:0003872|GO:0006002|GO:0006096
Spst4g02301 491 PRINTS ATP-dependent phosphofructokinase family signature 332 344 IPR022953 GO:0003872|GO:0006002|GO:0006096
Spst4g02301 491 PRINTS ATP-dependent phosphofructokinase family signature 117 136 IPR022953 GO:0003872|GO:0006002|GO:0006096
Spst4g02301 491 PRINTS ATP-dependent phosphofructokinase family signature 275 291 IPR022953 GO:0003872|GO:0006002|GO:0006096
Spst4g02301 491 Gene3D - 110 301 - -
Spst4g02301 491 PIRSF ATP_PFK_TP0108 1 55 IPR012004 GO:0003872|GO:0005524|GO:0006096
Spst4g02301 491 PIRSF ATP_PFK_TP0108 73 471 IPR012004 GO:0003872|GO:0005524|GO:0006096
Spst4g02301 491 PANTHER ATP-DEPENDENT 6-PHOSPHOFRUCTOKINASE 1 3 472 - -
Spst4g02301 491 Hamap ATP-dependent 6-phosphofructokinase [pfkA]. 20 467 IPR012004 GO:0003872|GO:0005524|GO:0006096
Spst4g02301 491 FunFam ATP-dependent 6-phosphofructokinase 109 301 - -
Spst4g02301 491 SUPERFAMILY Phosphofructokinase 94 489 IPR035966 GO:0003872|GO:0006096
Spst4g02301 491 Pfam Phosphofructokinase 116 414 IPR000023 GO:0003872|GO:0006096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02301 Spst-Chr4 63725462 63733744 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02301 K00850 - gmx:100796614 801.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00229 5 1988418 1992165 Spst4g02301 4 63725462 63733744 PCT