Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00227 ATGGGAGCCTCTAGATTTGTTTCGCGAGATTTATTCAGCTGGCTTACTGGGGAATCTGCGAGTTCTCTTCCTCCTCTGGACACCCCACATAGAGGGTTTCCCCCGCCAGCTTCACTGCCAGATTATATTGAACCAGGCAAGACCAAGATCACAACTCTCTCAAATGGTCTAAAAATAGCATCAGAAACTTCACCAAACCCTGCTGCCTCAATAGGGTTATATGTTGACTGTGGTTCCCTCTATGAGACGCCATTGTCAAGCGGGGCATCGCACCTGCTAGAGAAAATGGCTTTCAAGAGCACGACAAACCGAAGCCACTTTCGTGTTGTAAGGGAAGTGGAAGCAATTGGGGGTAATGTAGGAGCCTCAGCCTCTCGGGAGCAAATGGGCTATACTTTTGATGCTCTGAAAACCTATGTTCCACAAATGATTGAATTACTTGTTGACTGTGTACGGAACCCAGCGTTCTTGGATTGGGAGGTCAGCGAAGAGATTCGAAAGGTGAAAGCAGAGATTGGGGAACTAACAAACAATCCCCAGGGCCTACTTATGGAGGCAGTTCACTCTGTTGGTTATTCTGGAGCATTGGCTATTCCACTTTTGGCTTCTGAATCAGCACTGAACAGATTAAATGGTTCCATTTTAGAGGAATTTGTTGCCGAGAATTATACTGCACCTAGAATGGTACTTGCGGCATCTGGGGTTGAGCATGAAGAACTTCTATCCGTTGCTGAACCACTTCTCTCTGATCTACCAAATGTTCCACATTCTCAAGAACCAGGTTCTACATATGTTGGGGGTGATTTTCGTCGTCACGGTGAATCGGGGGCTGCACATGTAGCTATTGCCTTTGAAGTGCCTGGAGGCTGGAAAAAAGAGAAAGAAGCAATTGTTTTGACTGTTTTACAGATGCTTATGGGAGGAGGTGGATCATTCTCAGCTGGGGGACCTGGAAAGGGAATGCACTCAAGGCTGTATCTTCGTGTCTTGAATGAATATCAACAGATTCAATGTTTTTCTGCATTTAACAGTCTCTTCAACAACACAGGGTTATTTGGCATATATGCAACCACGAGCTCTGATTTTGTGACAAAAGCTGTTGACCTAGCAGCCGAAGAATTAATAGCACTCGCATCACCAGGACAAGTTTCACAGGTACAGCTTCACCGTGCCAAGGAATCCACGAAGTCTGCAGTACTAATGAATTTAGAATCCAGAATGATTGCATCAGAGGATATAGGAAGGCAGATATTGACTTATGGAGAAAGGAAGCCAGTGGAGCAGTTCTTAAAGGCAGTAGATGCAATCACTTTGAATGATATTACTAATTTTTCTGAGAAGATTATTTCCTCGCCTCTGACTATGGCATCCTATGGGGATGTTCTGAATGTCCCCGGTTATGAAACCGTTAGGAGCAAGTTCCATGCAAAATGA 1434 0.4484 MGASRFVSRDLFSWLTGESASSLPPLDTPHRGFPPPASLPDYIEPGKTKITTLSNGLKIASETSPNPAASIGLYVDCGSLYETPLSSGASHLLEKMAFKSTTNRSHFRVVREVEAIGGNVGASASREQMGYTFDALKTYVPQMIELLVDCVRNPAFLDWEVSEEIRKVKAEIGELTNNPQGLLMEAVHSVGYSGALAIPLLASESALNRLNGSILEEFVAENYTAPRMVLAASGVEHEELLSVAEPLLSDLPNVPHSQEPGSTYVGGDFRRHGESGAAHVAIAFEVPGGWKKEKEAIVLTVLQMLMGGGGSFSAGGPGKGMHSRLYLRVLNEYQQIQCFSAFNSLFNNTGLFGIYATTSSDFVTKAVDLAAEELIALASPGQVSQVQLHRAKESTKSAVLMNLESRMIASEDIGRQILTYGERKPVEQFLKAVDAITLNDITNFSEKIISSPLTMASYGDVLNVPGYETVRSKFHAK 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00227 477 FunFam mitochondrial-processing peptidase subunit alpha 262 470 - -
Spst5g00227 477 Gene3D - 262 471 - -
Spst5g00227 477 Gene3D - 40 250 - -
Spst5g00227 477 SUPERFAMILY LuxS/MPP-like metallohydrolase 272 467 IPR011249 GO:0046872
Spst5g00227 477 ProSitePatterns Insulinase family, zinc-binding region signature. 78 101 IPR001431 GO:0004222|GO:0006508
Spst5g00227 477 PANTHER METALLOPROTEASE 41 465 - -
Spst5g00227 477 Pfam Insulinase (Peptidase family M16) 59 201 IPR011765 -
Spst5g00227 477 SUPERFAMILY LuxS/MPP-like metallohydrolase 46 255 IPR011249 GO:0046872
Spst5g00227 477 FunFam Mitochondrial-processing peptidase subunit beta 38 253 - -
Spst5g00227 477 Pfam Peptidase M16 inactive domain 215 393 IPR007863 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00227 Spst-Chr5 1963317 1966768 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00227 K01412 - gmx:100810996 798.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00227 5 1963317 1966768 Spst5g00227 5 1963317 1966768 ECH
Spst5g00227 5 1963317 1966768 Spst4g02302 4 63734860 63739732 PCT