Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02302 ATGTACAGAGCAGCAGCTTCTTCATTCAGACGGCATCTCAAGGGCCATGGAGGCAATTTGGGGTCCACTAGGTCTTCGACTTCAGCCGCTGTAGCTGCAAGGACTGCCCAAGGTGGTTTGTTTAGCTGGCTTACTGGGGAGCGTTCTAGTTCTCTTCCTTCTCTGGATATACCCCTTGGTGGTGTTGCTCTCCCAGATCCACTTCCTGATTCTGTTGAACAAAGCAAGACCAAAATCACAACACTTTCCAATGGACTCAAAATAGCATCAGAGACCTCGCCTAACCCTGCAGCTTCAATTGGGTTGTATCTTGATTGTGGTTCCATCTATGAGAAGCCATTCTCAAGTGGAGCTTCACACTTGCTAGAGCGAATGGCTTTCAAAAGCACAACAAACCGTAGTCACTTTCGTATTGTAAGGGAGGTAGAAGCAATTGGTGGTAATATAGGAGCCTCAGCCTCACGGGAGCAAATGGGATATACATTTGATGCCTTGAAAACCTATGTTCCACAAATGGTGGAACTACTGGTTGACTCTGTAAGAAACCCAGCCTTCTTGGATTGGGAGGTCAATGAAGAGCTTCGGAAGGTGAAAGCAGAGCTTCGAGAACTCTCCAACAATCCCCAGGGCTTGCTCTTGGAAGCAATTCACTCTGCTGGTTATTCTGGTGCATTGGCTTATCCTCTCTTAGCTCCTGAAGCTGCATTGAACAGATTGGATGGCCCCACTTTGGAGGAATTTGTTACTGAGAATTACACAGCATCTAGAATGGTACTTGCAGCAGCGGGGGTTGAGCATGAAGAGCTTGTATCTATTGCTGAGCCACTTCTCTCTGATCTACCAAATGTCCCCCGTCCTGAAGAACCTAAATCTGTCTACATTGGGGGTGATTTTCGTCGTCATGGTGAATTAGGGGGTACACATGTTGCTCTTGCTTTTGAAGTGCCTGGTGGCTGGCATAAAGAGAAAGATGCTATAGTTTTGACTGTTTTACAGATGCTTATGGGAGGAGGTGGGTCATTCTCAGCAGGGGGCCCTGGAAAAGGGATGCACTCAAGGCTATATCTTCGCGTGCTGAATGAATATCAACAGATTCAATCATTTTCTGCATTCAACAGCATCTTCAATAATACAGGATTGTTTGGCATCTATGCAAGCACTAGCCCTGATTTTGCGTCAAAAGTTGTGGACATAGCAGCCAAAGAACTAATAGCAATTGCTTCCCCTGGACAAGTTACACAGGTACAGCTTGACCGAGCAAAAAAATCCACCAAGTCTGCAGTTCTAATGAATCTGGAATCTAGAATGATTGCATCAGAAGATATTGGAAGGCAGATTTTGACTTATGGAGAAAGGAAGCCTTTGGAACAGTTCCTGAAGGCTGTTGATGAAATCACGTTGAAAGATATCACTACAATTGCTCAGAAGATTATTTCCTCACCTTTGACCATGGCATCATATGGGGATGTCCTGAATGTGCCCAGTTATGAATCTGTTAATAGCAAATTCCATGCAAAATGA 1521 0.4504 MYRAAASSFRRHLKGHGGNLGSTRSSTSAAVAARTAQGGLFSWLTGERSSSLPSLDIPLGGVALPDPLPDSVEQSKTKITTLSNGLKIASETSPNPAASIGLYLDCGSIYEKPFSSGASHLLERMAFKSTTNRSHFRIVREVEAIGGNIGASASREQMGYTFDALKTYVPQMVELLVDSVRNPAFLDWEVNEELRKVKAELRELSNNPQGLLLEAIHSAGYSGALAYPLLAPEAALNRLDGPTLEEFVTENYTASRMVLAAAGVEHEELVSIAEPLLSDLPNVPRPEEPKSVYIGGDFRRHGELGGTHVALAFEVPGGWHKEKDAIVLTVLQMLMGGGGSFSAGGPGKGMHSRLYLRVLNEYQQIQSFSAFNSIFNNTGLFGIYASTSPDFASKVVDIAAKELIAIASPGQVTQVQLDRAKKSTKSAVLMNLESRMIASEDIGRQILTYGERKPLEQFLKAVDEITLKDITTIAQKIISSPLTMASYGDVLNVPSYESVNSKFHAK 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02302 506 Gene3D - 286 505 - -
Spst4g02302 506 MobiDBLite consensus disorder prediction 1 26 - -
Spst4g02302 506 Gene3D - 67 279 - -
Spst4g02302 506 Pfam Insulinase (Peptidase family M16) 88 232 IPR011765 -
Spst4g02302 506 Pfam Peptidase M16 inactive domain 244 422 IPR007863 -
Spst4g02302 506 FunFam mitochondrial-processing peptidase subunit alpha 291 499 - -
Spst4g02302 506 SUPERFAMILY LuxS/MPP-like metallohydrolase 76 286 IPR011249 GO:0046872
Spst4g02302 506 SUPERFAMILY LuxS/MPP-like metallohydrolase 304 497 IPR011249 GO:0046872
Spst4g02302 506 ProSitePatterns Insulinase family, zinc-binding region signature. 107 130 IPR001431 GO:0004222|GO:0006508
Spst4g02302 506 FunFam Mitochondrial-processing peptidase subunit beta 67 282 - -
Spst4g02302 506 PANTHER METALLOPROTEASE 70 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02302 Spst-Chr4 63734860 63739732 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02302 K01412 - gmx:100794691 899.042
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02302 4 63734860 63739732 Spst4g02302 4 63734860 63739732 ECH
Spst5g00227 5 1963317 1966768 Spst4g02302 4 63734860 63739732 PCT