Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00146 ATGGGCGCTTCTCTTCCTCCCAGAGAGTCTAACCTCTTCAAGCTTATTGTTAAATCCTATGAAACCAAACAATACAAAAAGGGTCTCAAAGCAGCAGATGCTATTTTGAAAAAATTCCCAGACCATGGAGAAACTTTATCAATGAAGGGGTTAACATTGAATTGTATGGATCGTAAGTCTGAAGCATATGAATTGGTTCGCCAAGGATTGAAGAATGACCTTAAAAGTCATGTTTGTTGGCATGTATATGGTCTTCTTTATCGGTCAGACAGAGAATATAGGGAAGCAATAAAGTGCTATCGAAATGCATTGAAAATAGATCCTGACAATATTGAAATACTGCGGGACTTGTCACTCTTACAGGCTCAAATGCGAGATTTAACTGGCTTTGTTGAGACACGACAACAACTCCTGACTCTCAAATCAAATCATCGCATGAACTGGATTGGCATGGGTTGGGTGGTGTTGCATTCTTGTAGGTTCTGGGATGTGATGAGACTGGGTAATGTTGTGGGTGGAGATTGGGGAACCAATGTTGTGGGTGGAGATTGGGGAATCAATGTTGCTATTGAAATTCTTGAAGCATATGAAGGGACATTGGAAGATGATTATCCTCCAGACAATGAACGGTGTGAGCATGGGGAAATGCTTTTGTATAAGATCTCCTTGTTGGAAGAGTGTGGATATTTTCAGAAAGCTCTTGAGGAGTTGCAGAAGAAAGAGTTAAAAATTGTTGATAAGCTTGCATATAAAGAACAGGAGGTCTCACTTCTAGTCAAGCTTGGCTGCTTAGAAGAAGGGGAGAAATTGTACCGGGCATTACTTTCCATGAATCCTGACAACTATAGATATTATGAAGGCCTCCAAAAATGTGTTGGATTATTTTCAGAAAATGGCTATTTTTCTCCTGATGAAATAGATCAGTTAGATGCCTTGTACAAAACACTTGGGCAGCAATATAAGTGGTCTTCTGCTGTTAAGAGAATACCACTGGATTTTTTACAAGGTGATAAATTTCGAGACGCAGCATATAGTTATATTAAGCCTCTCCTATCTAAGGGTGTACCATCTCTTTTCTCTGATCTTTCTTCGTTATACAATCAACCTGGGAAGGCCGACATTTTGGAACAGATCATTCTTGAGTTAGAGAGTTCAATTAAGTCCAGTGGTCAATACCCTGGATGTTTTGGTACTTTGGAACTCTTGTCTTCTTGTATAACAACCAAGCTTCATCCTCTATTCAGTATGGAAAAAGAGCCACCTTCAACCCTGATGTGGATTTTGTTCTTCTTGGCCCAGCATTATGATAGACGGGGCCAATATGAAGTTTCTCTTTCTAAAATTGATGAGGCTATTCATCACACACCTACTGTTATTGATCTGTATTCGGTCAAGAGTCGGATACTGAAGCATGCTGGTGATTTGGTTGCTGCTGCTGCATTTGCAGATGAAGCTAGGTGTATGGATCTTGCTGATCGTTATGTAAATAGTGAATGTGTTAAGCGCATGCTGCAGGCTGATCAGGTGGCTTTGGCAGAAAAAACTGCTGTATTGTTCACAAAAGATGGTGATCAACACAACAACCTACATGATATGCAGTGCATGTGGTCTGTGTCTAATGATGTGTACGAGCTTGCCTCTGCTGAAAGCTATTTCCGCCAAGGTGATCTTGGACTGGCTCTAAAGAAATTTCTAGCAGTGGAGAAGCATTATGCAGATATTACAGAAGATCAATTTGATTTTCATTCATACTGCTTAAGGAAAATGACATTGCGGACATATGTGGAAATGCTTAAATTTCAAGACCAATTGCATTCACATGCATACTTCCATAAAGCAGCTGCTGGAGCTATCAGATGTTACATCAAATTGCATGATTCTCCTCCAAAGTCAACAGCTGAGGAAGATAATAACATGTCGAAGTTGCTTCCTTCTCAGAAAAAGAAAATGAGGCAAAAACAGAGAAAGGCAGAAGCAAGAGCTAAGAAAGTAATCACTGGTACTGCTTTTGTCGGGAAATTCTTACGGGAAAGTATTCATGAGGCAGAAGAAAAAAATGAAGAATCAAGTGCCAGTGGAGTATCAAAGTCTGGGAAACGGCATGCAAAACCTGTTGATCCAGATCCACGTGGTGAAAAATTGTTACAGACGCCTCATGCTAGAGCACTTTGGATTGTAAATACACATAATGCCCATGCCATGCTCACTCTACCTTGTGTTGAAGATCCATTATTGGAAGCCACAAAATACTTGAAGCTGCTTCAGAAGAATTCACCTGACTCATTGGAGACACACTTTCTCTCTTTTGAATTATATATGAGAAAACAGAAAATTTTACTTGCCTTCCAGTCGAGGGGCCTTTGTGGTGTGATTGCTGTGAAGCAGTTACTGAGGTTGGATGCTGAACATCCTGATTCTCATCGTTGTCTGATTAAATTCTTCAATGAAGTGGGATCCATGAATGCGCCTGTGACTGAAAGTGAGAAACTTGTTTGGAGTGTCTTGGAAGCTGAGCGCCAAACTATTAGTCAGCTGCATGGGAAATCTCTGTTTGAGACAAATAATTCTTTCCTTGAAAAACATGAAGATTCTTTGATGCATAGAGCTGCTTTTGGAGAAATGTTGTATATTTTGAATCCCAACAGAAGGCCTGAGGCTGTCAAGTTGATTGAAGGGTCAACAAATAACCTTGTGCCAAGAAATGGTGCGCTTGGACCGATTGGGGAATGGAAACTTAAAGATTGTATTGCAGTTCATAAGCTCCTTGGAACTGTTCTTGTTGATCAGGATGCTGCATTAAGATGGAAAGTGCGTTGTGCCGAGTTTTTCCCATACTCCACGTACTTTGAGGGCAGTCATAGCTCTGCCGTTAATCAGATAGGCAAGAACACTGAAAATGGGAGTTCTAATCATGAGGAATCCGCCCCATCAAATGGGCAACTAGAGGCATTTAAAGATCTCACTATCGGAGGAAGTTGA 2979 0.4062 MGASLPPRESNLFKLIVKSYETKQYKKGLKAADAILKKFPDHGETLSMKGLTLNCMDRKSEAYELVRQGLKNDLKSHVCWHVYGLLYRSDREYREAIKCYRNALKIDPDNIEILRDLSLLQAQMRDLTGFVETRQQLLTLKSNHRMNWIGMGWVVLHSCRFWDVMRLGNVVGGDWGTNVVGGDWGINVAIEILEAYEGTLEDDYPPDNERCEHGEMLLYKISLLEECGYFQKALEELQKKELKIVDKLAYKEQEVSLLVKLGCLEEGEKLYRALLSMNPDNYRYYEGLQKCVGLFSENGYFSPDEIDQLDALYKTLGQQYKWSSAVKRIPLDFLQGDKFRDAAYSYIKPLLSKGVPSLFSDLSSLYNQPGKADILEQIILELESSIKSSGQYPGCFGTLELLSSCITTKLHPLFSMEKEPPSTLMWILFFLAQHYDRRGQYEVSLSKIDEAIHHTPTVIDLYSVKSRILKHAGDLVAAAAFADEARCMDLADRYVNSECVKRMLQADQVALAEKTAVLFTKDGDQHNNLHDMQCMWSVSNDVYELASAESYFRQGDLGLALKKFLAVEKHYADITEDQFDFHSYCLRKMTLRTYVEMLKFQDQLHSHAYFHKAAAGAIRCYIKLHDSPPKSTAEEDNNMSKLLPSQKKKMRQKQRKAEARAKKVITGTAFVGKFLRESIHEAEEKNEESSASGVSKSGKRHAKPVDPDPRGEKLLQTPHARALWIVNTHNAHAMLTLPCVEDPLLEATKYLKLLQKNSPDSLETHFLSFELYMRKQKILLAFQSRGLCGVIAVKQLLRLDAEHPDSHRCLIKFFNEVGSMNAPVTESEKLVWSVLEAERQTISQLHGKSLFETNNSFLEKHEDSLMHRAAFGEMLYILNPNRRPEAVKLIEGSTNNLVPRNGALGPIGEWKLKDCIAVHKLLGTVLVDQDAALRWKVRCAEFFPYSTYFEGSHSSAVNQIGKNTENGSSNHEESAPSNGQLEAFKDLTIGGS 992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00146 992 Pfam N-terminal acetyltransferase A, auxiliary subunit 212 719 IPR021183 -
Spst5g00146 992 Pfam N-terminal acetyltransferase A, auxiliary subunit 737 784 IPR021183 -
Spst5g00146 992 Gene3D - 556 824 - -
Spst5g00146 992 ProSiteProfiles TPR repeat profile. 77 110 IPR019734 GO:0005515
Spst5g00146 992 PANTHER N-TERMINAL ACETYLTRANSFERASE-RELATED 1 925 - -
Spst5g00146 992 PIRSF NAT_A 1 156 IPR021183 -
Spst5g00146 992 PIRSF NAT_A 185 917 IPR021183 -
Spst5g00146 992 Gene3D - 185 554 - -
Spst5g00146 992 Gene3D - 2 160 - -
Spst5g00146 992 MobiDBLite consensus disorder prediction 699 713 - -
Spst5g00146 992 MobiDBLite consensus disorder prediction 959 977 - -
Spst5g00146 992 SUPERFAMILY TPR-like 18 285 IPR011990 GO:0005515
Spst5g00146 992 SMART tpr_5 43 76 IPR019734 GO:0005515
Spst5g00146 992 SMART tpr_5 77 110 IPR019734 GO:0005515
Spst5g00146 992 SMART tpr_5 425 458 IPR019734 GO:0005515
Spst5g00146 992 SUPERFAMILY TPR-like 258 494 IPR011990 GO:0005515
Spst5g00146 992 MobiDBLite consensus disorder prediction 959 992 - -
Spst5g00146 992 MobiDBLite consensus disorder prediction 681 713 - -
Spst5g00146 992 Pfam TPR repeat 84 123 - -
Spst5g00146 992 MobiDBLite consensus disorder prediction 628 661 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00146 Spst-Chr5 1391152 1405058 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00146 K20792 - gmx:100776968 1509.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00146 5 1391152 1405058 Spst5g00146 5 1391152 1405058 ECH
Spst5g00146 5 1391152 1405058 Spst4g02377 4 64331798 64345076 PCT