Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02377 ATGGGCGCTTCTCTGCCTTCCAAGGAGGCCAACCTCTTCAAGCTTATTGTTGGCCTCAAAGCTGCTGATGCTATTTTGAAAAAATTTCCAGATCATGGAGAAACTTTGTCGATGAAGGGTTTGACGTTAAATTGCATGGATCGTAAATCTGAAGCATATGAACTTGTTCGTCAAGGATTAAAGAATGACCTTAAAAGTCATGTTTGCTGGCATGTTTATGGTCTTCTTTATCGATCAGATAGAGAATATAGGGAGGCAATTAAGTGTTATCGAAATGCACTAAAAATAGATCCTGACAATATTGAAATTCTTCGTGATCTATCACTACTCCAGGCACAAATGCGAGATTTAACAGGTTTTGTTGAGACAAGGCAACAACTTTTGACCTTGAAGCCAAATCATCGCATGAATTGGATTGGATTTTCTGTAGCCCATCATTTGAACTCCAATGCATCCAAAGCCGTTGAAATTTTGGAAGCGTATGAAGGTACTCTAGAAGAAGATTATCCTCCAGAAAATGAACGGTGCGAGCATGGGGAAATGCTTTTGTACAAGATCTCGTTGTTAGAGGAATGCAGTTTTCTTGAGAGAGCTCTGGAGGAGTTGCGCAAAAAAGAATATAAAATTGTTGATAAACTTGCATACAAAGAACAGGAGGTGTCACTTTTTGTAAAGCTTGGTCACTTGAAAGAAGGCGAAACTTTGTATCGGGCATTACTTTCAATGAATCCTGATAATTATAGATACTATGAAGGACTCCAAAAGTGTGTTGGACTATATCTAGAAGATGGCCAGTACTCGCCTGATCAAGTAGATCAGCTAGATGCGTTGTACAAAACACTTGTACAACAGTACAAGTGGTCTTCTGCTGTTAAGAGAATACCACTAGATTTTCTACAAGGTGACAAATTTCGAGAAGCAGCTGCCAATTATATTAGGCCTCTCCTAACAAAGGGAGTTCCCTCTCTCTTTTCTGATCTATCATCTTTGTACAATCACCCTTGGAAGGCAGACATTTTGGAACAACTTATTCTCGAGTTAGAGCAGTCAATTAGGATGTCAGGCCAATATCCCGGAGGGACGAACAAAGAACCCCCTTCAACTCTTATGTGGACTTTGTTTTTATTGGCTCAGCATTATGACAGGCGGGGTCAATATGAAATTGCTATTTCTAAAATTGATGAAGCTATAGAACATACACCTACAGTTATTGATCTATATTCCGTCAAGAGTCGGATACTGAAGCATGCTGGTGATTTGGTTGCTGCTGCTGCATTTGCAGATGAAGCTAGGTGTATGGATCTTGCTGATCGTTATGTTAATAGTGAATGTGTTAAGCGGATGCTGCAGGCTGATCAGGTGTCTTTGGCTGAAAAAACTGCTGTATTGTTCACAAAAGATGGGGATCAACACAATAACCTTCATGACATGCAGTGCATGTGGTATGAGCTTGCCTCGGGTGAAAGCTATTTCCGCCAGGGTGATCTTGGACGGGCGCTGAAAAAATTTTTAGCAGTAGAGAAGCATTATGCTGATATTACCGAGGACCAATTTGATTTTCATTCATATTGCTTACGAAAAATGACTTTGCGTACTTATGTGGAAATGCTTAGATTTCAAGACCAACTGCACTCGCATGCATATTTTCACAAAGCAGCAGCTGGGGCTATCAGATGCTATATTAAGTTGCATGATTCTCCCCCAAAGTCCACAGCAGAGGAAGATGATAATATGTCAAAGTTGCTTCCTTCTCAGAAAAAGAAATTGAGGCAAAAACAGAGAAAGGCAGAAGCAAGAGCCAAAAAAGAGGCAGAAGAAAAGAATGAAGAGTTAAGTGCAACTGGGGTATCAAAGTCTGGGAAGCGACATGTAAAACCTGTTGATCCTGATCCAAACGGGGAGAAGTTGTTACAGGTTGAAGATCCACTGTCAGAAGCCACTAAATACTTGAAGTTGCTGCAGAAGAATTCCCCTGATTCGTTGGAGACACACTTGCTTTCTTTTGAATTATATACAAGGAAACAAAAGATTTTGCTTGCCTTTCATGCTGTAAAGCAGTTACTGAGATTGGATGCTGAACACCCTGATTCTCATCGTTGCTTGATTAAATTCTTTCATAACGTGGGATCGATGAATGCGCCTGTGACCGACAGTGAGAAACTGATTTGGAGTGTCTTAGAGGCTGAGCGCCCAAATATTAGCCAGCTGCATGAGAAATCCTTGTTTGAAGCAAACGACTCCGTCCTTGAAAAACATAAAGATCATAATTCTTTGATGCATAGAGCAGCTTTTGCAGAAATCTTGCACATTTTGGATTCAAACAGAAAATTCGAGGCTGTTAAGTTTATTGAAGATTCAACAAATAACATTGTGCCCAGAAATGGAGCACTTGGACCAATCAGGGAATGGAAACTTAAAGACTGTATGGCAGTTCACAATCTTCTTGGAACAGTTCTTTCTGATCAGGATGCTGCATTGAGATGGAAGGTGCGTTGTGCAGATTACTTCCCATATTCTACGTACTTTGAGGGAAGTCACAGCTCTGCCTCTCCCAATTCGGCTTTCAACCAGTTACGGAAGAACTCTGAAAATGATAGTATTAACCATATCACATCAAACGGAAAATTAGAGACATTTAAAGATCTCACTATCTGA 2655 0.4034 MGASLPSKEANLFKLIVGLKAADAILKKFPDHGETLSMKGLTLNCMDRKSEAYELVRQGLKNDLKSHVCWHVYGLLYRSDREYREAIKCYRNALKIDPDNIEILRDLSLLQAQMRDLTGFVETRQQLLTLKPNHRMNWIGFSVAHHLNSNASKAVEILEAYEGTLEEDYPPENERCEHGEMLLYKISLLEECSFLERALEELRKKEYKIVDKLAYKEQEVSLFVKLGHLKEGETLYRALLSMNPDNYRYYEGLQKCVGLYLEDGQYSPDQVDQLDALYKTLVQQYKWSSAVKRIPLDFLQGDKFREAAANYIRPLLTKGVPSLFSDLSSLYNHPWKADILEQLILELEQSIRMSGQYPGGTNKEPPSTLMWTLFLLAQHYDRRGQYEIAISKIDEAIEHTPTVIDLYSVKSRILKHAGDLVAAAAFADEARCMDLADRYVNSECVKRMLQADQVSLAEKTAVLFTKDGDQHNNLHDMQCMWYELASGESYFRQGDLGRALKKFLAVEKHYADITEDQFDFHSYCLRKMTLRTYVEMLRFQDQLHSHAYFHKAAAGAIRCYIKLHDSPPKSTAEEDDNMSKLLPSQKKKLRQKQRKAEARAKKEAEEKNEELSATGVSKSGKRHVKPVDPDPNGEKLLQVEDPLSEATKYLKLLQKNSPDSLETHLLSFELYTRKQKILLAFHAVKQLLRLDAEHPDSHRCLIKFFHNVGSMNAPVTDSEKLIWSVLEAERPNISQLHEKSLFEANDSVLEKHKDHNSLMHRAAFAEILHILDSNRKFEAVKFIEDSTNNIVPRNGALGPIREWKLKDCMAVHNLLGTVLSDQDAALRWKVRCADYFPYSTYFEGSHSSASPNSAFNQLRKNSENDSINHITSNGKLETFKDLTI 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02377 884 MobiDBLite consensus disorder prediction 568 636 - -
Spst4g02377 884 Pfam N-terminal acetyltransferase A, auxiliary subunit 177 686 IPR021183 -
Spst4g02377 884 Gene3D - 2 493 - -
Spst4g02377 884 MobiDBLite consensus disorder prediction 596 612 - -
Spst4g02377 884 FunFam N-terminal acetyltransferase catalytic subunit (NAT1) 495 715 - -
Spst4g02377 884 SUPERFAMILY TPR-like 371 697 IPR011990 GO:0005515
Spst4g02377 884 ProSiteProfiles TPR repeat profile. 67 100 IPR019734 GO:0005515
Spst4g02377 884 PIRSF NAT_A 1 810 IPR021183 -
Spst4g02377 884 PANTHER N-TERMINAL ACETYLTRANSFERASE-RELATED 18 818 - -
Spst4g02377 884 Coils Coil 586 614 - -
Spst4g02377 884 Gene3D - 495 715 - -
Spst4g02377 884 MobiDBLite consensus disorder prediction 568 583 - -
Spst4g02377 884 FunFam N-terminal acetyltransferase A, auxiliary subunit 2 493 - -
Spst4g02377 884 SMART tpr_5 67 100 IPR019734 GO:0005515
Spst4g02377 884 SMART tpr_5 33 66 IPR019734 GO:0005515
Spst4g02377 884 SMART tpr_5 370 403 IPR019734 GO:0005515
Spst4g02377 884 Pfam TPR repeat 74 113 - -
Spst4g02377 884 SUPERFAMILY TPR-like 23 158 IPR011990 GO:0005515
Spst4g02377 884 Coils Coil 185 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02377 Spst-Chr4 64331798 64345076 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02377 K20792 - gmx:100820094 1587.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02377 4 64331798 64345076 Spst4g02377 4 64331798 64345076 ECH
Spst5g00146 5 1391152 1405058 Spst4g02377 4 64331798 64345076 PCT