LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Spst5g00124	ATGTTGCGAAGATTCCTCTCTCCTTCGAACCTCAAATCGCTACACACAGCGCTCTCACCTTCTCGTCCCCGATTCGCCGCCCCTCTTCTCAACCGCCACATCACCGCTCAATCAGGCGCTTCTTCCGTCAAAAAGAGGGTCGAAGATGTGGTGCCAATTGCTACCGGTCACGAGCGTGAGGAAATTCAGGCCGATCTCGAGGGAAGGGATATTCTTGAAATCAACCACCCTGTAGGTCCTTTCGGCACAAAGGAAGCACCTGCTTTTGTTAAATCTTACTACGACAGAAGGATCGTTGGATGCCCAGGAGGTGAAGGTGAAGATGAGCATGATGTTGTCTGGTTTTGGCTCGAGAAAGGCAGGCCTTATGAATGTCCAGTGTGCTCACAGTATTTTGAGCTGAAAGTGGTCGGACCTGGTGGCGATCCTTATGGACTCGGCGATCATCATTGA	453	0.5121	MLRRFLSPSNLKSLHTALSPSRPRFAAPLLNRHITAQSGASSVKKRVEDVVPIATGHEREEIQADLEGRDILEINHPVGPFGTKEAPAFVKSYYDRRIVGCPGGEGEDEHDVVWFWLEKGRPYECPVCSQYFELKVVGPGGDPYGLGDHH	150

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Spst5g00124	150	Gene3D	Cytochrome c oxidase, subunit Vb	43	137	IPR036972	GO:0005740\|GO:0005751\|GO:0006123
	Spst5g00124	150	Pfam	Cytochrome c oxidase subunit Vb	54	141	IPR002124	GO:0005740\|GO:0005751\|GO:0006123
	Spst5g00124	150	SUPERFAMILY	Rubredoxin-like	43	140	-	-
	Spst5g00124	150	ProSiteProfiles	Cytochrome c oxidase subunit Vb, zinc binding domain profile.	41	141	IPR002124	GO:0005740\|GO:0005751\|GO:0006123
	Spst5g00124	150	FunFam	Cytochrome c oxidase subunit Vb	43	137	-	-
	Spst5g00124	150	PANTHER	CYTOCHROME C OXIDASE SUBUNIT 5B, MITOCHONDRIAL	12	148	IPR002124	GO:0005740\|GO:0005751\|GO:0006123
	Spst5g00124	150	CDD	Cyt_c_Oxidase_Vb	42	139	IPR002124	GO:0005740\|GO:0005751\|GO:0006123

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Spst5g00124	Spst-Chr5	1157087	1159561	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Spst5g00124	K02265		-	gmx:100801050	280.411

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Spst4g02396	4	64465928	64470510	Spst5g00124	5	1157087	1159561	ECH
	Spst5g00124	5	1157087	1159561	Spst5g00124	5	1157087	1159561	ECH
	Spst5g00124	5	1157087	1159561	Spst4g02396	4	64465928	64470510	PCT