Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00122 ATGATTGCGCTTTTGATTCTCTATGCTCATAAAGGTTCCCTTCTTTTGTCTTTACCTCACCTTTTCATGGATGGTTGCAACATCATCACCCTATATGTAGTGACTGGGGTTGCTTGTGCTGCTTCTCCATGTTCTTCAAACAAAATGATTAATGCACATTCTCATATGGGCTCTGGTAGTAGAACCACTCGAAGAGGTTATGAGTTTGGAAAGACATACGTAGTGAGACCCAAAGGAAAACACCAAGCCACTATAGTTTGGTTGCATGGTCTTGGTGATAATGGTTTGAGCTCATCTCAGCTTTTGGAATCCCTTCCACTTCCAAATATAAAATGGATTTGTCCAACTGCCCCTAGCCGTCCTGTGGCAATACTTGGTGGTTTTCCTTGTACAGCATGGTTTGATGTGGGAGAACTTTCAGAAGATTTCCCAGATGATTGGGAGGGTTTGGATGCCTCAGCAACACACATTGCTAACTTGCTGTCAACAGAGCCTGCTGATGTGAAAGTTGCTATTGGAGGCTTCAGCATGGGTGCAGCAATAGCTCTATACTCTGCAACTTGTTTTGCCATTGGAAGGTATGGAAATGACACTCCCTATCCTATCAATCTAAGAACAGTGGTTGGACTGAGTGGTTGGCTTCCTGGATCAAGGAGTTTAAGGAACAAGATAGAAGTATCACATGAAGCAAGAAGACGTGCAACTTCATTACCCATTTTGTTGTGCCATGGACTGAGTGATGATGTAATCCTTCACAAATATGGTGAAAAATCAGCTCAATCTTTATGCTCAGCAGGGTTTCGATATGTTGCATTCAAATCCTATGATGGGCTTGGCCATTACACAGTTCCCAGAGAGATGGATGAGGTTTGTACTTGGCTTAGTTCAAGGTTGGGACTTGAAGGATCCTCATAA 915 0.4295 MIALLILYAHKGSLLLSLPHLFMDGCNIITLYVVTGVACAASPCSSNKMINAHSHMGSGSRTTRRGYEFGKTYVVRPKGKHQATIVWLHGLGDNGLSSSQLLESLPLPNIKWICPTAPSRPVAILGGFPCTAWFDVGELSEDFPDDWEGLDASATHIANLLSTEPADVKVAIGGFSMGAAIALYSATCFAIGRYGNDTPYPINLRTVVGLSGWLPGSRSLRNKIEVSHEARRRATSLPILLCHGLSDDVILHKYGEKSAQSLCSAGFRYVAFKSYDGLGHYTVPREMDEVCTWLSSRLGLEGSS 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00122 304 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 34 303 - -
Spst5g00122 304 Gene3D alpha/beta hydrolase 64 299 IPR029058 -
Spst5g00122 304 SUPERFAMILY alpha/beta-Hydrolases 73 298 IPR029058 -
Spst5g00122 304 Pfam Phospholipase/Carboxylesterase 73 295 IPR003140 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00122 Spst-Chr5 1146420 1151436 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00122 56 303 Acyl Lipid Metabolism Gene Families AT3G15650 78.629 7.26e-133 376
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00122 K06130 - gmx:100798395 494.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02397 4 64479247 64482189 Spst5g00122 5 1146420 1151436 ECH
Spst9g02518 9 59000277 59014894 Spst5g00122 5 1146420 1151436 ECH
Spst5g00122 5 1146420 1151436 Spst5g00122 5 1146420 1151436 ECH
Spst5g00122 5 1146420 1151436 Spst4g02397 4 64479247 64482189 PCT