Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02397 ATGAGCTACGCACATTATCATATGGGCTCTGGTAGTAGAACTGCTCGGAGAAGTTTGGAGTTTGGGAAAACACATGTGGTGAGGCCAAAAGGAAAACACCAAGCCACTTTAGTTTGGCTGCATGGCCTTGGTGACAATGGTTTGAGCTCATATCAGCTGCTGGAATCTCTTCCACTTCCAAATATAAAATGGATTTGCCCAACTGCTCCTACCCGCCCTGTAACCATACTTGGTGGTTTTTCCTGCAGTGCATGGTTTGACATGGGAGAACTTTCAGAAGATGGTCCACATGATTGGGAGGGTTTAGATGCATCAGCAGCACACATTGCCAACTTGCTGTCAACAGAGCCAGCTGATGTGAAAGTTGGAATTGGAGGCTTCAGTATGGGCGCTGCTGTAGCTCAATATTCTGCAACTTGTTTTGCAATGGGAAGGTATGGAAATGGCATTCCATACCCTGTGAACTTAAGAGCAGTTGTTGGACTAAGTGGCTGGCTTCCAGGATCAACGAGCTTAAGGAACAAAATTGAAGTGTCACATGAAGCTAGAAGAAGAGCTGCTTCATTGCCTGTTTTGTTGAGCCATGGAATCAGTGATGACGTAGTCCTCTACAAATACGGAGAGAAATCAGCTCAATCCTTAAGTTCAGCAGGGTTTCGATACATTACATTCAAATCCTATGATGGGCTTGGTCATTATACTGTTCCTAGGGAGATGGATGAGGTCTGCAATTGGCTTAACTCCAGGCTGGGGCTTGGGGGATCCTCATGA 771 0.4578 MSYAHYHMGSGSRTARRSLEFGKTHVVRPKGKHQATLVWLHGLGDNGLSSYQLLESLPLPNIKWICPTAPTRPVTILGGFSCSAWFDMGELSEDGPHDWEGLDASAAHIANLLSTEPADVKVGIGGFSMGAAVAQYSATCFAMGRYGNGIPYPVNLRAVVGLSGWLPGSTSLRNKIEVSHEARRRAASLPVLLSHGISDDVVLYKYGEKSAQSLSSAGFRYITFKSYDGLGHYTVPREMDEVCNWLNSRLGLGGSS 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02397 256 Gene3D alpha/beta hydrolase 15 251 IPR029058 -
Spst4g02397 256 Pfam Phospholipase/Carboxylesterase 24 247 IPR003140 GO:0016787
Spst4g02397 256 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 255 - -
Spst4g02397 256 SUPERFAMILY alpha/beta-Hydrolases 25 250 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02397 Spst-Chr4 64479247 64482189 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02397 1 255 Acyl Lipid Metabolism Gene Families AT3G15650 71.698 9.23e-127 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02397 K06130 - gmx:100782153 511.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02397 4 64479247 64482189 Spst5g00122 5 1146420 1151436 ECH
Spst9g02518 9 59000277 59014894 Spst4g02397 4 64479247 64482189 ECH
Spst4g02397 4 64479247 64482189 Spst4g02397 4 64479247 64482189 ECH
Spst5g00122 5 1146420 1151436 Spst4g02397 4 64479247 64482189 PCT