Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00111 ATGGCTGGCCTTCAAAGATCTGCAGTCTCCTTCAGGAGGCAGGGTTCTTCGGGCTTTGTGTGGGACGACAAGTTCTTAACAGAGGAATTCAACAAACTCAACAGTGAAGACCAAAACAACAACCACGACGGCGATGAGATCAAAGACCTTCAACTTCAATCGCCGCCGCCGCCACTCCACAGAACCCGCTCCAACGGCGGTCCTCGCGCCTACCGCACCGGCAAAGTCTCCCCGGCGATCGAGCCTCCGTCTCCCAGACTCTCCGCATGCGGCTTCTGCACCGCGTTTGGAAAAGCACCACCACGGGACCACAACAAGCCACCACGGACTGTACCCGCCAAGCATCGACCGAGGTAG 357 0.5798 MAGLQRSAVSFRRQGSSGFVWDDKFLTEEFNKLNSEDQNNNHDGDEIKDLQLQSPPPPLHRTRSNGGPRAYRTGKVSPAIEPPSPRLSACGFCTAFGKAPPRDHNKPPRTVPAKHRPR 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00111 118 PANTHER OS05G0542732 PROTEIN-RELATED 1 106 IPR031421 -
Spst5g00111 118 MobiDBLite consensus disorder prediction 32 118 - -
Spst5g00111 118 MobiDBLite consensus disorder prediction 32 49 - -
Spst5g00111 118 Pfam Domain of unknown function (DUF4666) 1 102 IPR031421 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00111 Spst-Chr5 1079483 1079839 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00111 - - gmx:100783364 178.333
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00111 5 1079483 1079839 Spst4g02405 4 64520509 64520847 PCT