Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02405 ATGGCTGGTTTGCAAAGATCTGCGGTGTCTTTCAGGAGACAAGGTTCATCAGGCCTTGTTTGGGACGACAAATTAGTGTCTGCTGAACTCAACAACGACCAACACCAAGACACAAAGGCTGCGGTTGCTGACAACCTTAACACAAAAACAACCCCACCACCCAACACCACCATCCAGAGAACCCGCTCCAACGGCGGCTACCGCACCGGAAAACTCACGCCGGCGATCGACCCTCCCTCTCCCAAGCTCTCTGCTTGCGGCTTCTGCACTGCTTTCTCTAAAACAGGGGAAAAGGGTCGCCGCGGCGCAAAGCCCGCTGCTAAGCACCGATCCAGGTAG 339 0.5546 MAGLQRSAVSFRRQGSSGLVWDDKLVSAELNNDQHQDTKAAVADNLNTKTTPPPNTTIQRTRSNGGYRTGKLTPAIDPPSPKLSACGFCTAFSKTGEKGRRGAKPAAKHRSR 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02405 112 MobiDBLite consensus disorder prediction 42 68 - -
Spst4g02405 112 MobiDBLite consensus disorder prediction 42 80 - -
Spst4g02405 112 PANTHER OS05G0542732 PROTEIN-RELATED 1 104 IPR031421 -
Spst4g02405 112 Pfam Domain of unknown function (DUF4666) 1 98 IPR031421 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02405 Spst-Chr4 64520509 64520847 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02405 - - pvu:PHAVU_010G154100g 162.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00111 5 1079483 1079839 Spst4g02405 4 64520509 64520847 PCT