Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00108 ATGAAAGAAAGCTCAGGAAACCCTCTGCACCTCAAGTCTGTGAACCACATCTCCCTCATCTGCACCTCCGTCGTACAATCTATCAACTTCTATCAGAACCTTCTCGGCTTCTTCCCCATCAGGAGGCCAGGATCATTTGATTTTGATGGGGCATGGCTATTTGGATATGGAATTGGAATTCACTTGCTGCAAGCAGACAACCCTAACAACATTCCAAGAAAGACAGAAATTAATCCCAAAGATAATCATATATCATTCCAGGCAAGATTTTATTCTGAGCTCTCTCTTACCCTGTCCTTGTCCTGGCTGTGCCGAAAGGACACAAAAAGACATTGTGATAACATGTATAGGTGCTTGTTAATTGTTAATTGTGAAAGCATGGGGGCAGTGGAGAAGAAGCTTGAGGAAATGGAGATAGAATACGTGCGTGCAATGGTAGAGGAAGGTGGGATTAAAGTGGATCAGTTGTTTTTTCATGACCCAGATGGGTTCATGATTGAGATATGCAATTGTGATAGCCTTCCCGTTATCCCCTTAGCAGGTGACATGGTCAGATCATGCTCTCGAGTGAACCTTCAGATGCTTCAACAGAGACAGATTCACCAAATTGTGAAGCAAGAGTCAACTTTTCCTTCGGGTCACACCAAAATTCAAAATACTATTGTTTAA 669 0.426 MKESSGNPLHLKSVNHISLICTSVVQSINFYQNLLGFFPIRRPGSFDFDGAWLFGYGIGIHLLQADNPNNIPRKTEINPKDNHISFQARFYSELSLTLSLSWLCRKDTKRHCDNMYRCLLIVNCESMGAVEKKLEEMEIEYVRAMVEEGGIKVDQLFFHDPDGFMIEICNCDSLPVIPLAGDMVRSCSRVNLQMLQQRQIHQIVKQESTFPSGHTKIQNTIV 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00108 222 Gene3D - 2 176 IPR029068 -
Spst5g00108 222 PANTHER - 5 200 - -
Spst5g00108 222 Coils Coil 127 147 - -
Spst5g00108 222 CDD VOC_like 14 168 - -
Spst5g00108 222 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 13 171 IPR037523 -
Spst5g00108 222 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 7 169 IPR029068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00108 Spst-Chr5 1060249 1061370 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00108 - - gmx:100305695 285.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00108 5 1060249 1061370 Spst5g00108 5 1060249 1061370 ECH
Spst5g00108 5 1060249 1061370 Spst4g02407 4 64531704 64533251 PCT