Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02407 ATGAAGGACAACAGTGTGGAAAACCCTCTGCGCCTTCAGTCTGTGAACCATATCTCCCTCATATGCAGATCAGTGGAAGAATCAATGGATTTCTACCAGAACGTTCTTGGGTTTTTCCCCATTAGGAGACCTGGTTCTTTTGATTTTGATGGGGCATGGTTATTCGGCCACGGGATTGGAATTCATTTACTAGAAGCAGAGAATCCAGAAAAGTTGCCGAAGAAGAAGGAAATTAACCCAAAGGATAATCATATATCTTTTCAGTGTGAGAGCATGGCAGCAGTGGAGAGGAAGCTGAAGGAGATGGATATTGCTTATGTGCGAGCAACGGTGGAGGAAGGTGGGATCCAAGTGGATCAACTATTTTTCCACGACCCTGATGGCTTCATGATCGAGATATGCAACTGTGATAGCCTTCCTGTGATTCCCTTGGTCGGTGAAGTAGCAAGATCATGTTCCCTTGTGAATCTTGAGAAGATGCAGAATCAGCAGCAGATACAGAACATGCTCCAACAACTGTGA 522 0.4483 MKDNSVENPLRLQSVNHISLICRSVEESMDFYQNVLGFFPIRRPGSFDFDGAWLFGHGIGIHLLEAENPEKLPKKKEINPKDNHISFQCESMAAVERKLKEMDIAYVRATVEEGGIQVDQLFFHDPDGFMIEICNCDSLPVIPLVGEVARSCSLVNLEKMQNQQQIQNMLQQL 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02407 173 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 15 133 IPR004360 -
Spst4g02407 173 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 8 135 IPR029068 -
Spst4g02407 173 CDD VOC_like 15 133 - -
Spst4g02407 173 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 14 136 IPR037523 -
Spst4g02407 173 Gene3D - 7 138 IPR029068 -
Spst4g02407 173 PANTHER - 7 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02407 Spst-Chr4 64531704 64533251 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02407 - - pvu:PHAVU_010G154400g 320.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02407 4 64531704 64533251 Spst4g02407 4 64531704 64533251 ECH
Spst5g00108 5 1060249 1061370 Spst4g02407 4 64531704 64533251 PCT