Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00086 ATGGAGAAGGAAGGAGTAAGAAGAGGAAATGTTAGAAGGAGTTGTTTAGCAACCTCTGCTGCACAGTTTTGGTTCAATGCTGCAGAGTTCTTCCCTAAAAAAGGAGTGGAAAGTGGAAAAGGCATCTACCTCACTTTTTTTCCACAATTGGAATGCTCTTTCACTCGTACCATCTTTAGACTACATATCATGTTCTCTTCCTTTTCTCATTGCCTTCTGCTCTTCTTCTTTCTACTATTTTCTCTGGTTTTAGGGGATAAAGCGTTTACAGGAACATATGGTGTAAACTATGGTAGAATAGCTGACAACCTGCCTCCCCCAGAAAGTGTGGTTACCTTACTCAAAGCAGCAAAAATTAAGAACATTAGGATTTATGATGCTGATCATCAGGTCCTCCGTGCCTTCAAAGGGTCTGGCATTGAAATTGTGGTTGGACTTGGCAACGAATTTCTTACGGGCATTAGTGTGGGGGAGGATAGAGCCATGAGTTGGGTCAAAGAAAACGTTCAGCAATTTCTTCCAGGAACCAAAATTCGGGGAATTGCAGTGGGAAATGAAATCTTGGGAGGCACAGATTTACAACTCTGGGAAGTTTTGCTACCTGCAGTAAAGAATGTTTACAATGCCCTTAAAAAGCTTGGTCTAGCAAAAGATGTTCAAGTGTCAAGTCCACATTCTGAGGCTGTATTTGCTAATTCCTTTCCTCCATCCTCCTGCACTTTCAAGGAAGATGTCCTTCCATATATGAAGCCTCTCTTACAATTCTTCTCACAAATTGGCACTCCTTTTTTCATAAATGCATACCCCTTCCTTGCTTATAAGAATGATCCACAACATATTGACCTTAACTATGCCCTCTTCCAAAAAAGTCCTGGGATTTATGATGCAAAGACTAAGCTGCATTATGGTAACATGTTTGAGGCACAGGTTGATGCAGCTTATGCTGCCTTGGAGAAGGTTGGTTTTGACAAGATGGAAGTGATTGTTTCCGAGACTGGTTGGGCTTCTCATGGGGATGACAATGAAGCTGGAGCAACAATAAAGAATGCAAGGACCTACAATCTTAACTTGCGTAAGAGGTTACTCAAGAAAAAAGGTACCCCTTATAGGCCAAAGAAAATGGTGAGGGCTTATATCTTTGCTTTGTTTAATGAGAATTTGAAGTCTGGTCCAACGTCAGAGAGAAACTTTGGATTGTTTAAGGCTGATGGAAGCATTGCATATGATATTGGATTCACTGGACTTGTACCTTCTTCAGCAACTTCATCATCTTTCCTTTCCTTCAAGGGAATTGGAACCTCGTCTGTGATGGCTTTTACAAGTTTAGTTGCTTTTCTTTTTGTAGCATTGTAA 1353 0.4087 MEKEGVRRGNVRRSCLATSAAQFWFNAAEFFPKKGVESGKGIYLTFFPQLECSFTRTIFRLHIMFSSFSHCLLLFFFLLFSLVLGDKAFTGTYGVNYGRIADNLPPPESVVTLLKAAKIKNIRIYDADHQVLRAFKGSGIEIVVGLGNEFLTGISVGEDRAMSWVKENVQQFLPGTKIRGIAVGNEILGGTDLQLWEVLLPAVKNVYNALKKLGLAKDVQVSSPHSEAVFANSFPPSSCTFKEDVLPYMKPLLQFFSQIGTPFFINAYPFLAYKNDPQHIDLNYALFQKSPGIYDAKTKLHYGNMFEAQVDAAYAALEKVGFDKMEVIVSETGWASHGDDNEAGATIKNARTYNLNLRKRLLKKKGTPYRPKKMVRAYIFALFNENLKSGPTSERNFGLFKADGSIAYDIGFTGLVPSSATSSSFLSFKGIGTSSVMAFTSLVAFLFVAL 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00086 450 SUPERFAMILY (Trans)glycosidases 93 411 IPR017853 -
Spst5g00086 450 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 77 413 IPR044965 GO:0004553|GO:0005975
Spst5g00086 450 FunFam Glucan endo-1,3-beta-glucosidase 14 91 417 - -
Spst5g00086 450 Pfam Glycosyl hydrolases family 17 94 412 IPR000490 GO:0004553|GO:0005975
Spst5g00086 450 Gene3D Glycosidases 92 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00086 Spst-Chr5 925919 929943 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00086 88 427 Glycoside Hydrolase AT3G15800 74.487 0.0 530
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00086 - - gmx:100815468 679.093
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00086 5 925919 929943 Spst5g00086 5 925919 929943 ECH
Spst5g00086 5 925919 929943 Spst4g02421 4 64615007 64616737 PCT