Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02421 ATGTTGCCTTACTCAAGTTCCTTCTTTCTTTGCCTTCTCTTCTTTTCTGTAACATTTTCTCATGTTTTTGGGGATAAAATATTTACTGGAACATATGGAGTAAACTATGGTAGGATTGCAGACAATCTACCTTCTCCTCATAGCGTGGTTACCCTTCTCAAAGCTGCCAAGATTAGGAACATCAGAATATATGATGCTGATCATCAAGTCCTGAGTGCCTTCAAAGGGTCAGGGATTGCAATTGTTATAGGGCTACCGAATGAGTTTCTGAGAGACATAAGTTTGGGGGAGGATCGTGCCATGAATTGGATCAAAGAAAATGTTCAGCCATTTCTTCCAGGAACCAGAATTCGTGGCATTGCTGTGGGGAATGAAATATTAGGAGGAGGAGATATGGGGCTGTGGGAAGTGTTGCTGCCAGCAGCTAAAAATGTGTACACTGCACTAGATAGGCTCAATTTGGCACATCAAATTCAGGTGTCAAGTCCACATTCTGAGGCTGTGTTTGCAAATTCCTACCCTCCATCTGCATGCACTTTTAGGGACGATGTGCTCCCTTTCATGAAGCCCCTCTTGCAATTCTTCTCACAAATTGGCACTCCCTTCTACATAAATGCATACCCCTTCTTGGCCTATAAGAATGACCCCGAACACATTGACATAAACTATGCTCTCTTCAAGAAAAATCCAGGGATTTATGATGCCAAGACTAAACTGCACTATGACAACATGTTTATGGCCCAAATTGATGCAGCTTATGCAGCCTTGGAGAAAGTTGGGTTTGACAAGATGGAGGTCATTGTCTCTGAGACTGGTTGGGCCTCTCGTGGGGATCAGAACGAACCTGGTGCAACACTGAAAAATGCAAAGACTTACAATAAAAACTTGAAAAAGCTATTGTTCAAGAAAAAGGGTACCCCTTATAGGCCTAAGATGGTTGTGAGGGCTTATATTTTTGCCTTGTTTAACGAAAATTTGAAGCCTGGCCCAACATCTGAGAGAAACTTTGGATTGTTCAAACCAGATGGAAGCATTGCATATGATATAGGCTTCACTGGACTTGTTCCTTCCTCAGCAACCTCCTCTTTTCTTTCCTTCAAGGGTATTGGATCTTTATATGTAATGGTTTCTACAAGTTGTGCTGCTTTTCTTCTTCTTGTAGCATTATAA 1170 0.4179 MLPYSSSFFLCLLFFSVTFSHVFGDKIFTGTYGVNYGRIADNLPSPHSVVTLLKAAKIRNIRIYDADHQVLSAFKGSGIAIVIGLPNEFLRDISLGEDRAMNWIKENVQPFLPGTRIRGIAVGNEILGGGDMGLWEVLLPAAKNVYTALDRLNLAHQIQVSSPHSEAVFANSYPPSACTFRDDVLPFMKPLLQFFSQIGTPFYINAYPFLAYKNDPEHIDINYALFKKNPGIYDAKTKLHYDNMFMAQIDAAYAALEKVGFDKMEVIVSETGWASRGDQNEPGATLKNAKTYNKNLKKLLFKKKGTPYRPKMVVRAYIFALFNENLKPGPTSERNFGLFKPDGSIAYDIGFTGLVPSSATSSFLSFKGIGSLYVMVSTSCAAFLLLVAL 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02421 389 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 15 352 IPR044965 GO:0004553|GO:0005975
Spst4g02421 389 Gene3D Glycosidases 31 354 - -
Spst4g02421 389 FunFam Glucan endo-1,3-beta-glucosidase 14 30 356 - -
Spst4g02421 389 Pfam Glycosyl hydrolases family 17 33 351 IPR000490 GO:0004553|GO:0005975
Spst4g02421 389 SUPERFAMILY (Trans)glycosidases 32 350 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02421 Spst-Chr4 64615007 64616737 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02421 28 360 Glycoside Hydrolase AT3G15800 77.844 0.0 547
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02421 - - vra:106773873 688.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02421 4 64615007 64616737 Spst4g02421 4 64615007 64616737 ECH
Spst5g00086 5 925919 929943 Spst4g02421 4 64615007 64616737 PCT