Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00085 ATGACCCTTTCTATGGCTTCTGCGGAGAGCGTGAACGAGGTGGGACCTGGATATGTCTTCAAAGAAGAAATCCATCTCACCGTCCTCAAAACCTCTCTCTTCTTCGCCGGCGATGGCTTCACCGTCTACGATTGCAAAGGTCAGCTCGTCTTCCGAGTTGACTCTTACGGACCCGACACTCGCGACAGAGACGAACTCGTTCTCATGGATCCTAACGGACGTTGTCTACTCACTGTTCGTCGAAAGAGGCCGAGTTTGCATCAACGGTGGGAAGGCTTCAAAGGGGAGAGAATGGACGGTGATAAACCAATCTTCAGCGTGAAGAGAGCGTCGATCATAGGACGGTCGCGTGCGAGTTTGACGGTGGAGATGTACGATAAGCCGGGCGAGGAGTACCAGATCGAAGGGTGCTTCTCGCAGCGATGCTGCACGATTTTCAATGTGACGAAGGAATCTGTGGCTGAGATTCGTCGTAAGGTGGACCCCACCACAAGCGTTGTGCTTGGGAAGGAAGTGTTCTCTCTTTGCGTCAAGGCGGGGTTTGACGCGGCTTTTGCCATGGGATTTGTTCTGGTCCTTGATCAGATCAACGGTGAGGACTACGTTGATAATGGTGCGACCACGGAGCCTGCGGTGCACCCAGCCGCAGAAGATTGA 657 0.5342 MTLSMASAESVNEVGPGYVFKEEIHLTVLKTSLFFAGDGFTVYDCKGQLVFRVDSYGPDTRDRDELVLMDPNGRCLLTVRRKRPSLHQRWEGFKGERMDGDKPIFSVKRASIIGRSRASLTVEMYDKPGEEYQIEGCFSQRCCTIFNVTKESVAEIRRKVDPTTSVVLGKEVFSLCVKAGFDAAFAMGFVLVLDQINGEDYVDNGATTEPAVHPAAED 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00085 218 Pfam LURP-one-related 13 192 IPR007612 -
Spst5g00085 218 Gene3D - 13 202 IPR038595 -
Spst5g00085 218 SUPERFAMILY Tubby C-terminal domain-like 14 197 IPR025659 -
Spst5g00085 218 PANTHER - 25 197 IPR007612 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00085 Spst-Chr5 923328 924139 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00085 - - gmx:100527456 404.831
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00085 5 923328 924139 Spst5g00085 5 923328 924139 ECH
Spst5g00085 5 923328 924139 Spst4g02422 4 64640097 64640858 PCT