Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02422 ATGAGAGAGGAGTTGGTGGTGCAAGAAGGGTACGTTGGGAATGAAGAGAGGCTCCTTACAGTGCTTAAAACCTCTCTCTTCTTCAATGGTGATGGCTTCGCTGTCTACGATTCCAAGGGCCAACTCGTTTTCCGCTTTGACTCATATGGTCCTCGCGCGCGTGACAAGGACGAGCTTGTTCTCATGGATCCCAATGGCCGTTCTCTTCTCACTCTTCGCCGAAAGAAACCGAGTCTTCATCAGCGGTGGGAAGGATTCAGAGGAGAGAGAAGGGACGGGGATAAACCCGTTTTCAGCGTGAAGAGATCGTCGATCATCGGACGGGCGCGGACGAGCGTGGCGGTGGAGGTGTACGATAAGGCAGGTGTGGAGTACCTGATCGAAGGGTGTTTCCCGCAGCGGTGGTGCAAGGTTTTGAATGCGGGGAAGGAAGCAGTGGCTGAGATTCGCCGGAAGGTGGACCCGACCACCAGTGTTATGCTGGGGAAGGAAGTGTTTTGGCTTTGCGTGAAGCCTGGTTTTGATTCGGCCTTTGCCATGGGGTTGGTCCTGGCGCTTGATCAGATGAACGGTGAGGATTACTTTGATGATAGAATAGTGGAGGCCGTGGTGCAACCTGCCGCAGAAGATCCGGAAATAGTTTCACCGGTTCCAGTTTGA 660 0.5364 MREELVVQEGYVGNEERLLTVLKTSLFFNGDGFAVYDSKGQLVFRFDSYGPRARDKDELVLMDPNGRSLLTLRRKKPSLHQRWEGFRGERRDGDKPVFSVKRSSIIGRARTSVAVEVYDKAGVEYLIEGCFPQRWCKVLNAGKEAVAEIRRKVDPTTSVMLGKEVFWLCVKPGFDSAFAMGLVLALDQMNGEDYFDDRIVEAVVQPAAEDPEIVSPVPV 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02422 219 Pfam LURP-one-related 6 184 IPR007612 -
Spst4g02422 219 SUPERFAMILY Tubby C-terminal domain-like 5 190 IPR025659 -
Spst4g02422 219 Gene3D - 4 194 IPR038595 -
Spst4g02422 219 PANTHER - 19 191 IPR007612 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02422 Spst-Chr4 64640097 64640858 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02422 - - gmx:100789078 382.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02422 4 64640097 64640858 Spst4g02422 4 64640097 64640858 ECH
Spst5g00085 5 923328 924139 Spst4g02422 4 64640097 64640858 PCT