Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00069 ATGGATTGGTTCTCGTGGCTTTCCAAAACTGGGCTTGAGCCATCTCTAGTGTACGAGTATGGCCTTACCTTTGCTCACAACGAGCTTGAAGATGACGACATGTTTTACTTCAACCACGAGTTTCTCCAAAGCATGGGCATCTCCATAGCAAAGCACAGACTAGAGATCCTCAAGCTCGCTAGAAAAGAGAAGGGAAAGAGCCCTCGCGCGGTGGCAAAGCTCGTGGTGGCAATCCAAAGGACGAAGAGGAACTTGGCTAACTATGTGAGGACGCTGATGCACAGAGAAGAATCATCATCAGCACTTGTTGTGGTGCCACCATCAAGGCCTAGTAGTGGTTTAGGGACAAGGTGGAAGAGTGCTGTGATGAAGAGGAGCAAAAAGTTGGTGGCCAAGCAAGAGACACTCTTTCTCACAAATGGAAGTTCCACAGTAGTTCCAGCTCATCCTGTTCTTGATGGTTTTTCTAGTCCCGTGGTGTACCATTTCCGGAAGGAGAAGATGGATGGAGATGATGATGATGATGATGGCTACTGGTCTGCTGCTGTTGAAGAGATCAAGTGGGATGCCATGTTTCAGGATCTAAAGCCTAACTGA 597 0.4791 MDWFSWLSKTGLEPSLVYEYGLTFAHNELEDDDMFYFNHEFLQSMGISIAKHRLEILKLARKEKGKSPRAVAKLVVAIQRTKRNLANYVRTLMHREESSSALVVVPPSRPSSGLGTRWKSAVMKRSKKLVAKQETLFLTNGSSTVVPAHPVLDGFSSPVVYHFRKEKMDGDDDDDDGYWSAAVEEIKWDAMFQDLKPN 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00069 198 SUPERFAMILY SAM/Pointed domain 5 64 IPR013761 -
Spst5g00069 198 CDD SAM_superfamily 2 62 - -
Spst5g00069 198 Gene3D - 1 70 IPR013761 -
Spst5g00069 198 PANTHER OSJNBA0033G05.11 PROTEIN 1 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00069 Spst-Chr5 826888 827484 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00069 - - gmx:102660142 316.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00069 5 826888 827484 Spst5g00069 5 826888 827484 ECH
Spst5g00069 5 826888 827484 Spst4g02446 4 64815311 64815916 PCT