Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02446 ATGGATTGGTTCTCATGGCTTTCCAAAACATGTCTTGAGCCAACACTAGTGTATGAGTATGGCCTTACTTTTGCACACAATGAGCTTGAAGAAGAAGACATAATCTACTTCAACCATGAGTTTCTCATGAGCATGGGGATCTCCATAGCCAAACACAGGCTAGAGATTCTCAAGCTTGCAAGGAAAGTGAAGGGAAAGAGGGCACCACGCCCTGTGACAAGGCTCATGGTGGCGATCAAGAGGACAAAGAGGTGCTTAGCCAATTACTTCCGCACGTTCATCAGCTGTGAAGAAGAGTCATCAGCACTTGTTGTGGTGCCATCATCATTATCATCATCAAGGACAAGGCCTTATGGGACAAGATGGAAGAGTCATGTGATGAAGAGGAACAAAAAGTTGATGGCGTCTAAGCAAGAGAGGCTCTTGCTCACAAATGGAAGTCCTAACACTGTGGTGCATGGTCTTGATGCTTATACTAGTCCTATGGTTTACCATTTCCACAAGGAGGAAAAAATGGAAGGAGATAACGATGATGGATACTGGTCTTCGGCTGCTACAGAAGAAATCAGGTGGGATACCATGTTCCAGGATCTAAAGCCAAATTGA 606 0.4472 MDWFSWLSKTCLEPTLVYEYGLTFAHNELEEEDIIYFNHEFLMSMGISIAKHRLEILKLARKVKGKRAPRPVTRLMVAIKRTKRCLANYFRTFISCEEESSALVVVPSSLSSSRTRPYGTRWKSHVMKRNKKLMASKQERLLLTNGSPNTVVHGLDAYTSPMVYHFHKEEKMEGDNDDGYWSSAATEEIRWDTMFQDLKPN 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02446 201 PANTHER OSJNBA0033G05.11 PROTEIN 1 201 - -
Spst4g02446 201 Gene3D - 1 68 IPR013761 -
Spst4g02446 201 CDD SAM_superfamily 2 62 - -
Spst4g02446 201 SUPERFAMILY SAM/Pointed domain 6 67 IPR013761 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02446 Spst-Chr4 64815311 64815916 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02446 - - pvu:PHAVU_010G157800g 357.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02446 4 64815311 64815916 Spst4g02446 4 64815311 64815916 ECH
Spst5g00069 5 826888 827484 Spst4g02446 4 64815311 64815916 PCT