Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g03375 ATGCGTACTACGGCCGAATTTCAAGGTTCTGTTCTGAATCTTCGTGGGGTTCAGGTTCACTCCATGGAGGGTTCAAGCATGGAGCAAGAGCTTGATTTGTTTCAAAAGCGTGTGACTGAGCGGTTCCTGGAGCTATCTTCAGTTGAAAGTGATGAATTGCTCTCTCTTTCATGGATCAGGAAGCTGCTGGATTCGTTTCTGTGTTGCCAAGAGGAGTTCAGGGTGATTCTCCACAACCACAGGGCTCAGGTGTTGAAGCACCCTCCCTTGGATCGCATGGTGGGTGAGTTTTTTGAAAGGAGTGTGAAGGCACTTGATGTGTGCAACGCAATCCGTGATGGGGTTGAGCAGATTAGGCAGTGGCAGAAGCTCTTGGAGATTGTTCTCTGTGCATTGGATCACAAGAGGAGCATTGGGGAAGGTCAATTTCGCCGCGCCAAGAAGGCGCTTGTTGATTTGGCCATTGGAATGCTTGATGATAAGGACTCCAACTCCAGTGGTTCTATAGCTCATAGGAACAGGTCCTTTGGTAGAAACAACAATGGTTCAAGGGATCATAACCATAGCAATAATCAGCATAATTCCTTGGGGCATTTTAGGTCACTTTCTTGGAGTGTGTCAAGGAATTGGTCTGCTGCTAGGCAGCTACAAGCCATTGGGAACAACTTGTCCCCTCCTAAGGCTAATGATCTTGTTGTCACTAATGGCCTTGCTTTGCCTATTTACACAATGAGTTGTGTTCTAGTGTTTGTTATGTGGGCACTTGTGGCCGCAATTCCATGCCAGGACCGTGGGCTGGGGCTCCATTTCTCGGTGCCAAGGCAGTTCCTGTGGGCGGCTCCATTGATGGCACTGCACGAGCGGATCGTGGAGGAGTCAAAAAAGAGGGAGAGAAAGAACACTTGTGGGTTGCTGAAGGAGATTCACCAGATTGAGAAGTGTGCTAGGGTGATCAATGAGTTGGCTGATTCTGTGCAGTTTCCTTTGAGTGAGAAGAAGGGAGAAGAGGTTAGGCAGAAAGTGCAAGATGTTTCAAGGGTTTGTGAAGCCTTGAAAGATGGATTAGACCCTATGGAACGCCAAGTGAGGGAGGTGTTTCACAGAATTGTTCGCAGCAGAACTGAGGGGCTTGACACTCATGGCAGAGGGTAA 1152 0.4844 MRTTAEFQGSVLNLRGVQVHSMEGSSMEQELDLFQKRVTERFLELSSVESDELLSLSWIRKLLDSFLCCQEEFRVILHNHRAQVLKHPPLDRMVGEFFERSVKALDVCNAIRDGVEQIRQWQKLLEIVLCALDHKRSIGEGQFRRAKKALVDLAIGMLDDKDSNSSGSIAHRNRSFGRNNNGSRDHNHSNNQHNSLGHFRSLSWSVSRNWSAARQLQAIGNNLSPPKANDLVVTNGLALPIYTMSCVLVFVMWALVAAIPCQDRGLGLHFSVPRQFLWAAPLMALHERIVEESKKRERKNTCGLLKEIHQIEKCARVINELADSVQFPLSEKKGEEVRQKVQDVSRVCEALKDGLDPMERQVREVFHRIVRSRTEGLDTHGRG 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g03375 383 PANTHER BPS1-LIKE PROTEIN 13 379 - -
Spst4g03375 383 Pfam Protein ROH1-like 7 379 IPR008511 -
Spst4g03375 383 ProSiteProfiles R3H domain profile. 331 383 IPR001374 GO:0003676
Spst4g03375 383 MobiDBLite consensus disorder prediction 163 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g03375 Spst-Chr4 73909195 73910346 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g03375 - - gmx:100806977 682.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g03375 4 73909195 73910346 Spst4g03375 4 73909195 73910346 ECH
Spst4g03375 4 73909195 73910346 Spst10g00862 10 9210739 9211959 PCT