LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Spst10g00862	ATGCCCGCAACAGACTTCCTTGGTTCATCTCCTGCATCGTTAGCCCATTTTGGCCGGTCACTTCTCAGTCTTCGTCGCGAACAGGTTCACTCCATTTCCATGGAAGGGTCAAGCTTGGAGGCTGAGCTGGAATCCTTTCAGCAACACGTCACTGACCGGTTTTTGGAACTCTCTTCTGTTGCTCATGATAATTTGCTTTCACTCTCGTGGGTTGGAAAGCTTCTTGATTGCTTCCTCTGTTGCCAAGAGGAATTCAGAACCATTGTCCGCACCCACAAGGCACAGGTGTTGAGACCCCCGTTGGATCGCATGGTGTCTGAGTACTTTGACCGCAGTGTGAAGGCTTTGGATGTTTTTAACGCCATTCGTGACGGGATTGAGCAGATTCGCCAATGGCAGAAGCTGATGGAGATTGTCCTCTATGCATTAGGGCATCAGAGGGGCATTGGAGAGGGCCAATTTCGAAGAGCTAGGAAGGCCCTCATTGATTTGACAATTGGGATGCTTGATGATAAGGACTCCAGTGCTTCAATTGCGTATAGAAACCGGTCCTTTGGCCGCAGCGCTGGTAGTAGAGATCATTATCATAACCATAGTCATGGTCACAATCAAAGTAGCAGTAATACCTTTCATCATCGGTCTTTGGGGCATTTTCGATCGCTTTCATGGAGTGTTTCTCGGACTTGGTCTGCTGTCAGGCAGCTCCAAGCAATTGGGAACAACATTAATCCACCTAAGGCAAATGAGCTGGTGGCTTCTGGTGGCCTTGCAATGCCTGTGTTCATCATGAATTCGGTCCTGTTGTTTGTTGTGTGGGCTCTGGTGGCTGCTATTCCGTGCCAGGACCGCGGGTTACATGCCCATTTTACCATTCCTAGGAACTTCTCCTGGGCTGTTACATTGCTCTCGCTTCACGAAAGGATCATGGAGGAGTCAAAGAAAAGGGAGCGCAAAAACTCCTGTGGCTTGCTCAGGGAGATTCAACAAATGGAGAAATGTGCTAGATCGATGAATGAATTGTCTGATTCTGTGCAATTCCCGTTGACAGAGGAGAAAGAACAGGAGGTTAAACAGATAGTGCAGGAGGTCTCACAAGTTTGTGATGCTTTGAAAGACGGGCTAGACCCTTTGGAGCGCCAAGTAAGGGAGGCTTTCCATAGAATTGTTCGTAGTCGATCAGAGGGGCTTGACTCTCTTGTTAGGCCAACCTATGCTGAGTAA	1221	0.4848	MPATDFLGSSPASLAHFGRSLLSLRREQVHSISMEGSSLEAELESFQQHVTDRFLELSSVAHDNLLSLSWVGKLLDCFLCCQEEFRTIVRTHKAQVLRPPLDRMVSEYFDRSVKALDVFNAIRDGIEQIRQWQKLMEIVLYALGHQRGIGEGQFRRARKALIDLTIGMLDDKDSSASIAYRNRSFGRSAGSRDHYHNHSHGHNQSSSNTFHHRSLGHFRSLSWSVSRTWSAVRQLQAIGNNINPPKANELVASGGLAMPVFIMNSVLLFVVWALVAAIPCQDRGLHAHFTIPRNFSWAVTLLSLHERIMEESKKRERKNSCGLLREIQQMEKCARSMNELSDSVQFPLTEEKEQEVKQIVQEVSQVCDALKDGLDPLERQVREAFHRIVRSRSEGLDSLVRPTYAE	406

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Spst10g00862	406	Pfam	Protein ROH1-like	15	399	IPR008511	-
	Spst10g00862	406	PANTHER	BPS1-LIKE PROTEIN	17	399	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Spst10g00862	Spst-Chr10	9210739	9211959	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Spst10g00862	-		-	gmx:100818059	667.922

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Spst4g03375	4	73909195	73910346	Spst10g00862	10	9210739	9211959	PCT