Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g03296 ATGTCATCTATTTTTATCAGCATGCCACTTTCTTCTGAAGAAGTTCAGCTTCAAACACTGGACACCAAAGAAAAAGGTATTCCCATTTCCTCTTCTCAATCGGAAACTGCTACCTCTATCCATCCACAGCCATCAAATTGGTACCCTCAACCAATGCCAGAAGGCCATGAACCCCAAGAAGCAAACAACCAATCTGGCATCAAAGCGTTCAAGGTCAAGAGGTTTGACTCTTTCAAAACATGGTCTGGGAGACTTGAAAGAAAGCTATTATTTCTACGACGAAAGCGACCGAGAAAAACTTCAGAAGATGGTAGCAACATCTCCAGGAACCCTGATTGCCCTTTACCTGTTGATCGGTATTTCGGTGCATTGGAAGGTCCAGAGTTAGAAACTCTCAGGGCTTCAGAAGAGACAGTGCTTCCTCAGGACATGCAATGGCCATTTCTTCTTAGGATCCCAATTGCCTCTTTTGGCATTTGCCTAGGTGTAGGTAGCCAAGCAATTCTTTGGAAAGTAATAGCCACATCTACTTCCACTAAATATCTTCACATAAGCCTCAAAGTTAACTTAGTCTTCTGGATCATATCCATTGCTCTTCTTGCCACACTTTTCACCATCTATCTTCTCAAAATCATTCTCTACTTTGAAGCAGTTCGTCGTGAGTACTACCATCCAATCCGTGTTAACTTCTTCTTTGCACCGTGGATATCTCTCTTGTTCTTGGCTATTGGAGTTCCCCCATCAGTTGCCAAAGAATTGCCCCATGCTCTCTGGTACATTCTAATGACACCAATATTCTGCCTTGAACTTAAGATCTATGGACAATGGATGTCCGGGTGCCAAAGGAGGCTCTCAAAGGTTGCCAATCCGACAAACCATTTATCAATTGTTGGAAATTTTGTGGGGGCCTTACTTGGGGCTTCTATGGGCCTAACAGAAGGGCCCATTTTCTTCTATGCTGTTGGGCTGGCCCACTACATAGTCCTCTTTGTGACTCTCTATCAGAGACTCCCAACAAATGAGACCCTCCCAAAAGAGCTTTCTTTTTGCTATCCGGATAAACTTTTTCAGAGGATTCACGTAGATTCTCGCTTGCATGTTTCAAAGACAATATTTGGTTTTCTTACTCTCATCTCCACGCTCATAGTAACGGCACTGCTTGTGTCAACTATATTGCATGCCTTTGTCTATAAAGACCTCTTCCCCAATGACCTTGCCATTGCCATAAGTTCTAGAAAGAGAAGGCCACAAAAGAAGTGGCTAGCTCTTAACGGGAGCCATGGTCATTCCAGAGAGATCGAAAATTACTTGAAGTTTGCGAACTCTGATAAAATTGATTTAGAAGCTTCTACCCCAATACCCAATGGCACAGAAGATTCACCATCTAGTTGA 1392 0.431 MSSIFISMPLSSEEVQLQTLDTKEKGIPISSSQSETATSIHPQPSNWYPQPMPEGHEPQEANNQSGIKAFKVKRFDSFKTWSGRLERKLLFLRRKRPRKTSEDGSNISRNPDCPLPVDRYFGALEGPELETLRASEETVLPQDMQWPFLLRIPIASFGICLGVGSQAILWKVIATSTSTKYLHISLKVNLVFWIISIALLATLFTIYLLKIILYFEAVRREYYHPIRVNFFFAPWISLLFLAIGVPPSVAKELPHALWYILMTPIFCLELKIYGQWMSGCQRRLSKVANPTNHLSIVGNFVGALLGASMGLTEGPIFFYAVGLAHYIVLFVTLYQRLPTNETLPKELSFCYPDKLFQRIHVDSRLHVSKTIFGFLTLISTLIVTALLVSTILHAFVYKDLFPNDLAIAISSRKRRPQKKWLALNGSHGHSREIENYLKFANSDKIDLEASTPIPNGTEDSPSS 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g03296 463 Gene3D - 148 351 IPR038665 -
Spst4g03296 463 PANTHER S-TYPE ANION CHANNEL SLAH3 68 348 IPR030183 GO:0006873|GO:0008308|GO:0016020
Spst4g03296 463 CDD TDT_SLAC1_like 153 347 - -
Spst4g03296 463 MobiDBLite consensus disorder prediction 25 61 - -
Spst4g03296 463 MobiDBLite consensus disorder prediction 25 45 - -
Spst4g03296 463 Pfam Voltage-dependent anion channel 152 349 IPR004695 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g03296 Spst-Chr4 72729825 72732190 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g03296 K26672 - gmx:100816556 639.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g03296 4 72729825 72732190 Spst10g00909 10 9887061 9890093 PCT