Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00909 ATGAGATCTTTTGAAATGCTATACCATCCTATTCTCATACACACTCTTTTCAATTTACTCTCTACTATGGTGAATTACACGTTTAGGCCTAGCATGGAAAACAACCTTAACCGTGTAACAGAAGGGCATGGCTTGCCTAAAGTTCCATCATTAGTTCAACATATATCATCAAATGATGTAGCCAACTTTGACACTGTTCACTTGAAAAGTCTCAGCTCGTCTTTCAAAGTAAGGCTCGTTACCATTACAGAAGGTGATGAACACGAACATTCGGCCAGATATCATCAAAATAAGCATTCGGTATTTATCAACATGCCAATCTCTTGCGAAGATGTTCAGCTACATAACACAATAAGAGTTCTCTATAGTGGCCAAACTGATTCTAGCAATGCTGCTCCCATTTTCTCTTCTCAATCAACTACTACGGACTCCAAGCCTCCATTGCCATCACAATCGATGCCAAATGGCAGTGTGCACCCAGAGGCAGCAAGCACAGTGAATCTTACCAATCGTGAAAGCATCAAAACCTTGAACGATAAGAGAACTAACCTTTTCAAAACATGGTCCAGTAAACTTGAGGTGAAATTATCAATTCTGCGTGGAAGGGTACATACACAAAGTGTGGAAGAGGATGCCAGCTTAAGCAACACTAATAAGCCTTTACCTGTTGATTTGTTCTTCAAAACATTGAAAGGTCCACAGAAGTCTTCAGAAGAGTTGGTGCTTCCTCAGGACAAGCAGTGGCCATTTCTTCTTCGGTTTCCAATTTCATCTTTTGGTATTTGTCTTGGAGTTAGCAGTCAAGCAATTCTTTGGAAAGCATTGGCCACGTCACCTTCCACTGAATTTCTTCACATAAACCCGAAAATAAATTTCATCCTGTGGCTCATCTCTGTTGCTCTTGTTGCAACTATTTTCACCATCTATCTCTTCAAAATAATTCTCTATTTTGAAGCAGTTCGGCGCGAGTACCATCATGCAGTTCGTGTTAACTTCTTCTTTGCTCCATGGGTAGCCCTCTTGTTCTTAGGTCTTGGAGTTCCTTCATCATTTGCCAAAGAATTGCCTCATGCAGTGTGGTACATTCTAATGATTCCATTGTTCTGCCTTATGCTCAAAATATATGGCCAGTGGATGTTTGGGGGCAAAAGAATGATCTCAAAGGTGGCCAATCCATCGAATATGCTAGCAATTGTTGGAAATTTTGTGGGGGCCTTATTGGGTGCATCTATGGGCCTAAAAGAAGGGCCTATTTTCTTCTTTGCTATTGGGCTAGCTCACTACTTGGTGATATTTGTAACTCTCTCACAGATGCTTCCAACAAATAAGACCATCCCCAAAGACCTTCATCCAGTGTTCTTTCTTTTGGTTGCACCACCTAGTGTTGCTGCAATGGCATTGGCTAAGATTCAGGGTTCTTTTCAATATGAATCACGGATTTTCTATTTCACTTCCATGTTTCTATATCTCTCGCTGGCAGTTCGGGTCAATCTTTTCAGAGGATTCAAATTCTCAATTTCATGGTGGGCCTACACTTTTCCAATGACTGCCGCAGCAATTGCTACCATAACCTACACAAATGAAGTCACAAATGTTGTAACTCAATCTTTGTGCATAATATTGAGTCTCATTTCTACATTCACATTAACAGCAGTGCTTGTCTCCACCATAGTTCATGCCTTTGTCATCCAAGACCTCTTTCCCAATGACCTTGCCATTGCCACAAGCGAGAGAAAGCGAAAAACACAGAAGAAATGCTTTCCCTTAGGACTTGGGAGCCGTGGTCATTCCAAAAAGACTGAAAATTACTTGAAGTTTGTGAACTCGGATAAAAATGATTTAGTTTAG 1848 0.408 MRSFEMLYHPILIHTLFNLLSTMVNYTFRPSMENNLNRVTEGHGLPKVPSLVQHISSNDVANFDTVHLKSLSSSFKVRLVTITEGDEHEHSARYHQNKHSVFINMPISCEDVQLHNTIRVLYSGQTDSSNAAPIFSSQSTTTDSKPPLPSQSMPNGSVHPEAASTVNLTNRESIKTLNDKRTNLFKTWSSKLEVKLSILRGRVHTQSVEEDASLSNTNKPLPVDLFFKTLKGPQKSSEELVLPQDKQWPFLLRFPISSFGICLGVSSQAILWKALATSPSTEFLHINPKINFILWLISVALVATIFTIYLFKIILYFEAVRREYHHAVRVNFFFAPWVALLFLGLGVPSSFAKELPHAVWYILMIPLFCLMLKIYGQWMFGGKRMISKVANPSNMLAIVGNFVGALLGASMGLKEGPIFFFAIGLAHYLVIFVTLSQMLPTNKTIPKDLHPVFFLLVAPPSVAAMALAKIQGSFQYESRIFYFTSMFLYLSLAVRVNLFRGFKFSISWWAYTFPMTAAAIATITYTNEVTNVVTQSLCIILSLISTFTLTAVLVSTIVHAFVIQDLFPNDLAIATSERKRKTQKKCFPLGLGSRGHSKKTENYLKFVNSDKNDLV 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00909 615 Gene3D - 250 567 IPR038665 -
Spst10g00909 615 Pfam Voltage-dependent anion channel 254 557 IPR004695 GO:0016020|GO:0055085
Spst10g00909 615 MobiDBLite consensus disorder prediction 131 170 - -
Spst10g00909 615 CDD TDT_SLAC1_like 253 556 - -
Spst10g00909 615 PANTHER S-TYPE ANION CHANNEL SLAH3 173 581 IPR030183 GO:0006873|GO:0008308|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00909 Spst-Chr10 9887061 9890093 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00909 K26672 - vra:106771185 882.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g00909 10 9887061 9890093 Spst10g00909 10 9887061 9890093 ECH
Spst4g03296 4 72729825 72732190 Spst10g00909 10 9887061 9890093 PCT